1NWM	Protein Transport	date	Feb 06, 2003
title	Gat Domain Of Human Gga1
authors	S.Suer, S.Misra, L.F.Saidi, J.H.Hurley
compound		source
Molecule: Adp-Ribosylation Factor Binding Protein Gga1 Chain: X Fragment: Gat Domain Synonym: Golgi-Localized, Gamma Ear-Containing, Arf-Binding 1; Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_strain: Rosetta (De3) Expression_system_vector_type: Plasmid Expression_system_plasmid: Phis-Parallel2
symmetry	Space Group: H 3	R_factor 0.252 R_Free 0.286
crystal cell	length a length b length c angle alpha angle beta angle gamma 76.660 76.660 60.816 90.00 90.00 120.00
method	X-Ray Diffraction	resolution	2.40 Å
related structures	by homologous chain: 1O3X, 1X79
Gene Ontology	Chain Function Process Component X
Primary reference	Structure of the GAT domain of human GGA1: a syntaxin amino-terminal domain fold in an endosomal trafficking adaptor., Suer S, Misra S, Saidi LF, Hurley JH, Proc Natl Acad Sci U S A 2003 Apr 15;100(8):4451-6. PMID:12668765

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (23 Kb) [Save to disk] Biological Unit Coordinates (1nwm.pdb1.gz) 18 Kb CSU: Contacts of Structural Units for 1NWM Likely Quarternary Molecular Structure file(s) for 1NWM Structure Factors (64 Kb) Retrieve 1NWM in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 1NWM from S2C, [Save to disk] Re-refined 1nwm structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 1NWM in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 1NWM

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 1NWM, from MSDmotif at EBI Classification of representative domains in scop (Structural Classification of Proteins)     - Domain d1nwmx_, region X [Jmol] [rasmolscript] [script source]

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1nwm_X] [1nwm] SWISS-PROT database: [Q9UJY5] Domain organization of [GGA1_HUMAN] by SWISSPFAM

Other resources with information on 1NWM

Community annotation for 1NWM at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

Movements, Movies and Images

Images from IMB Jena Image Library of Biological Macromolecules.

You may enter another PDB ID code

Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]

---

OCA© by Jaime Prilusky, 1996-2014,2022 Bioinformatics Unit Weizmann Institute of Science

---