1OCY date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand CIT, SO4, ZN enzyme
related structures by homologous chain: 1H6W
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceThe structure of the receptor-binding domain of the bacteriophage T4 short tail fibre reveals a knitted trimeric metal-binding fold., Thomassen E, Gielen G, Schutz M, Schoehn G, Abrahams JP, Miller S, van Raaij MJ, J Mol Biol 2003 Aug 8;331(2):361-73. PMID:12888344
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (88 Kb) [Save to disk]
  • Biological Unit Coordinates (1ocy.pdb1.gz) 244 Kb
  • LPC: Ligand-Protein Contacts for 1OCY
  • CSU: Contacts of Structural Units for 1OCY
  • Likely Quarternary Molecular Structure file(s) for 1OCY
  • Structure Factors (695 Kb)
  • Retrieve 1OCY in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1OCY from S2C, [Save to disk]
  • Re-refined 1ocy structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 1OCY in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1ocy] [1ocy_A]
  • SWISS-PROT database: [P10930]
  • Belongs to the gp27/5 t4-baseplate (t4-bp) family according to TCDB.

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