1OIQ Kinase date Jun 24, 2003
title Imidazopyridines: A Potent And Selective Class Of Cyclin-Dependent Kinase Inhibitors Identified Through Structure-Based Hybridisation
authors J.F.Beattie, G.A.Breault, K.F.Byth, J.D.Culshaw, R.P.A.Ellston, S.Green, C.A.Minshull, R.A.Norman, R.A.Pauptit, A.P.Thomas, P.J.Jewsbury
compound source
Molecule: Cell Division Protein Kinase 2
Chain: A
Synonym: P33 Protein Kinase
Ec: 2.7.1.37
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Expression_system: Spodoptera Frugiperda
Expression_system_taxid: 7108
Expression_system_strain: Sf9
Expression_system_vector_type: Baculovirus
symmetry Space Group: P 21 21 21
R_factor 0.227 R_Free 0.271
crystal
cell
length a length b length c angle alpha angle beta angle gamma
54.625 72.715 72.886 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.31 Å
ligand HDU enzyme Transferase E.C.2.7.1.37 BRENDA
related structures by homologous chain: 1OIY, 1V1K
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceImidazo[1,2-a]pyridines: a potent and selective class of cyclin-dependent kinase inhibitors identified through structure-based hybridisation., Anderson M, Beattie JF, Breault GA, Breed J, Byth KF, Culshaw JD, Ellston RP, Green S, Minshull CA, Norman RA, Pauptit RA, Stanway J, Thomas AP, Jewsbury PJ, Bioorg Med Chem Lett 2003 Sep 15;13(18):3021-6. PMID:12941325
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (50 Kb) [Save to disk]
  • Biological Unit Coordinates (1oiq.pdb1.gz) 44 Kb
  • LPC: Ligand-Protein Contacts for 1OIQ
  • CSU: Contacts of Structural Units for 1OIQ
  • Likely Quarternary Molecular Structure file(s) for 1OIQ
  • Structure Factors (92 Kb)
  • Retrieve 1OIQ in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1OIQ from S2C, [Save to disk]
  • Re-refined 1oiq structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 1OIQ in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1OIQ
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 1OIQ, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1oiqa_, region A [Jmol] [rasmolscript] [script source]
  • Fold representative 1oiq from FSSP and Dali (Families of Structurally Similar Proteins)
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1oiq] [1oiq_A]
  • SWISS-PROT database: [P24941]
  • Domain organization of [CDK2_HUMAN] by SWISSPFAM
  • Domain found in 1OIQ: [S_TKc ] by SMART
  • Other resources with information on 1OIQ
  • Community annotation for 1OIQ at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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