1R0X Transport Protein date Sep 23, 2003
title Cystic Fibrosis Transmembrane Conductance Regulator (Cftr) N Binding Domain One (Nbd1) With Atp
authors H.A.Lewis, S.G.Buchanan, S.K.Burley, K.Conners, M.Dickey, M.Dorwa R.Fowler, X.Gao, W.B.Guggino, W.A.Hendrickson
compound source
Molecule: Cystic Fibrosis Transmembrane Conductance Regulat
Chain: A, B, C, D
Fragment: Nbd1 Domain (Residues 389-673)
Synonym: Cftr, Camp- Dependent Chloride Channel
Engineered: Yes
Organism_scientific: Mus Musculus
Organism_common: House Mouse
Organism_taxid: 10090
Gene: Cftr Or Abcc7
Expression_system: Escherichia Coli Bl21(De3)
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De3)
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet26b
symmetry Space Group: P 4 21 2
R_factor 0.211 R_Free 0.266
length a length b length c angle alpha angle beta angle gamma
173.292 173.292 110.460 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.20 Å
ligand ACY, ATP, MG enzyme
related structures by homologous chain: 1R0W, 1XMI
A, D, C, B

Primary referenceStructure of nucleotide-binding domain 1 of the cystic fibrosis transmembrane conductance regulator., Lewis HA, Buchanan SG, Burley SK, Conners K, Dickey M, Dorwart M, Fowler R, Gao X, Guggino WB, Hendrickson WA, Hunt JF, Kearins MC, Lorimer D, Maloney PC, Post KW, Rajashankar KR, Rutter ME, Sauder JM, Shriver S, Thibodeau PH, Thomas PJ, Zhang M, Zhao X, Emtage S, EMBO J 2004 Jan 28;23(2):282-93. Epub 2003 Dec 18. PMID:14685259
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (187 Kb) [Save to disk]
  • Biological Unit Coordinates (1r0x.pdb1.gz) 47 Kb
  • Biological Unit Coordinates (1r0x.pdb2.gz) 47 Kb
  • Biological Unit Coordinates (1r0x.pdb3.gz) 47 Kb
  • Biological Unit Coordinates (1r0x.pdb4.gz) 46 Kb
  • Biological Unit Coordinates (1r0x.pdb5.gz) 349 Kb
  • Biological Unit Coordinates (1r0x.pdb6.gz) 348 Kb
  • LPC: Ligand-Protein Contacts for 1R0X
  • CSU: Contacts of Structural Units for 1R0X
  • Likely Quarternary Molecular Structure file(s) for 1R0X
  • Structure Factors (791 Kb)
  • Retrieve 1R0X in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1R0X from S2C, [Save to disk]
  • Re-refined 1r0x structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 1R0X in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1R0X
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1R0X, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1r0xa_, region A [Jmol] [rasmolscript] [script source]
        - Domain d1r0xb_, region B [Jmol] [rasmolscript] [script source]
        - Domain d1r0xc_, region C [Jmol] [rasmolscript] [script source]
        - Domain d1r0xd_, region D [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1r0x_B] [1r0x_C] [1r0x_D] [1r0x] [1r0x_A]
  • SWISS-PROT database: [P26361]
  • Domain organization of [CFTR_MOUSE] by SWISSPFAM
  • Domain found in 1R0X: [AAA ] by SMART
  • Other resources with information on 1R0X
  • Community annotation for 1R0X at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

  • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022
    Bioinformatics Unit
    Weizmann Institute of Science