1RFA Serine Threonine-Protein Kinase date Apr 26, 1995
title Nmr Solution Structure Of The Ras-Binding Domain Of C-Raf-1
authors S.D.Emerson, V.S.Madison, R.E.Palermo, D.S.Waugh, J.E.Scheffler, K.L.Tsao, S.E.Kiefer, S.P.Liu, D.C.Fry
compound source
Molecule: Raf1
Chain: A
Fragment: Ras Binding Domain, Residues 55 - 132 With An Additional Ala At The N-Terminus;
Synonym: Raf-Rbd, C-Raf-1
Ec: 2.7.1.-
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Organ: Fetal Liver
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_plasmid: Pdw333
methodSolution NMR
enzyme Transferase E.C.2.7.1 BRENDA
related structures by homologous chain: 1RRB

Primary referenceSolution structure of the Ras-binding domain of c-Raf-1 and identification of its Ras interaction surface., Emerson SD, Madison VS, Palermo RE, Waugh DS, Scheffler JE, Tsao KL, Kiefer SE, Liu SP, Fry DC, Biochemistry 1995 May 30;34(21):6911-8. PMID:7766599
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (634 Kb) [Save to disk]
  • CSU: Contacts of Structural Units for 1RFA
  • Original NMR restraints for 1RFA from PDB
  • Retrieve 1RFA in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1RFA from S2C, [Save to disk]
  • View 1RFA in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1RFA
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 1RFA, from MSDmotif at EBI
  • Genome occurence of 1RFA's fold from GeneCensus
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1rfa__, region [Jmol] [rasmolscript] [script source]
  • Fold representative 1rfa from FSSP and Dali (Families of Structurally Similar Proteins)
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1rfa] [1rfa_A]
  • SWISS-PROT database: [P04049]
  • Domain organization of [RAF1_HUMAN] by SWISSPFAM
  • Domain found in 1RFA: [RBD ] by SMART
  • Other resources with information on 1RFA
  • Community annotation for 1RFA at PDBWiki (http://pdbwiki.org)
  • NMR Ensemble (OLDERADO: core, domain and representative structure database)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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