1RTJ	Nucleotidyltransferase	date	May 03, 1995
title	Mechanism Of Inhibition Of Hiv-1 Reverse Transcriptase By Non-Nucleoside Inhibitors
authors	J.Ren, R.Esnouf, C.Ross, Y.Jones, D.Stammers, D.Stuart
compound		source
Molecule: Hiv-1 Reverse Transcriptase Chain: A Synonym: Hiv-1 Rt Ec: 2.7.7.49 Engineered: Yes		Organism_scientific: Human Immunodeficiency Virus 1 Organism_taxid: 11676 Strain: Hxb2 Isolate Cell_line: 293 Gene: Hiv-1 Pol Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_strain: 293 Expression_system_gene: Hiv-1 Pol
Molecule: Hiv-1 Reverse Transcriptase Chain: B Synonym: Hiv-1 Rt Ec: 2.7.7.49 Engineered: Yes		Organism_scientific: Human Immunodeficiency Virus 1 Organism_taxid: 11676 Cell_line: 293 Gene: Hiv-1 Pol Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_strain: 293 Expression_system_gene: Hiv-1 Pol
symmetry	Space Group: P 21 21 21	R_factor 0.219 R_Free NULL
crystal cell	length a length b length c angle alpha angle beta angle gamma 137.500 109.400 72.300 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	2.35 Å
ligand	CSD	enzyme	Transferase E.C.2.7.7.49 BRENDA
related structures	by homologous chain: 1RTH, 1VRU
Gene Ontology	Chain Function Process Component A B
Primary reference	Mechanism of inhibition of HIV-1 reverse transcriptase by non-nucleoside inhibitors., Esnouf R, Ren J, Ross C, Jones Y, Stammers D, Stuart D, Nat Struct Biol 1995 Apr;2(4):303-8. PMID:7540935

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (173 Kb) [Save to disk] Biological Unit Coordinates (1rtj.pdb1.gz) 168 Kb LPC: Ligand-Protein Contacts for 1RTJ CSU: Contacts of Structural Units for 1RTJ Likely Quarternary Molecular Structure file(s) for 1RTJ Retrieve 1RTJ in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 1RTJ from S2C, [Save to disk]

View 1RTJ in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 1RTJ

Ramachandran plot from PDBSum

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 1RTJ, from MSDmotif at EBI Genome occurence of 1RTJ's fold from GeneCensus Classification of representative domains in scop (Structural Classification of Proteins)     - Domain d1rtja2, region A:1-429 [Jmol] [rasmolscript] [script source]     - Domain d1rtja1, region A:430-543 [Jmol] [rasmolscript] [script source]     - Domain d1rtjb1, region B:2-431 [Jmol] [rasmolscript] [script source] Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH Summaries and structural analyses of PDB data files from PDBSum Identification of Protein Pockets & Cavities at CASTp

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1rtj_B] [1rtj] [1rtj_A] SWISS-PROT database: [P04585] Domain organization of [POL_HV1H2] by SWISSPFAM

Other resources with information on 1RTJ

Community annotation for 1RTJ at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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