1VRU	Nucleotidyltransferase	date	Apr 19, 1995
title	High Resolution Structures Of Hiv-1 Rt From Four Rt- Inhibitor Complexes
authors	J.Ren, R.Esnouf, E.Garman, D.Somers, C.Ross, I.Kirby, J.Keeling, G.Darby, Y.Jones, D.Stuart, D.Stammers
compound		source
Molecule: Hiv-1 Reverse Transcriptase Chain: A Synonym: Hiv-1 Rt Ec: 2.7.7.49 Engineered: Yes		Organism_scientific: Human Immunodeficiency Virus 1 Organism_taxid: 11676 Cell_line: 293 Gene: Hiv-1 Pol Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_strain: 293 Expression_system_gene: Hiv-1 Pol
Molecule: Hiv-1 Reverse Transcriptase Chain: B Synonym: Hiv-1 Rt Ec: 2.7.7.49 Engineered: Yes		Organism_scientific: Human Immunodeficiency Virus 1 Organism_taxid: 11676 Strain: Hxb2 Isolate Cell_line: 293 Gene: Hiv-1 Pol Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_strain: 293 Expression_system_gene: Hiv-1 Pol
symmetry	Space Group: P 21 21 21	R_factor 0.187 R_Free NULL
crystal cell	length a length b length c angle alpha angle beta angle gamma 143.200 116.800 66.400 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	2.40 Å
ligand	AAP, CSD	enzyme	Transferase E.C.2.7.7.49 BRENDA
related structures	by homologous chain: 1HRH, 1RTJ
Gene Ontology	Chain Function Process Component A B
Primary reference	High resolution structures of HIV-1 RT from four RT-inhibitor complexes., Ren J, Esnouf R, Garman E, Somers D, Ross C, Kirby I, Keeling J, Darby G, Jones Y, Stuart D, et al., Nat Struct Biol 1995 Apr;2(4):293-302. PMID:7540934

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (165 Kb) [Save to disk] Biological Unit Coordinates (1vru.pdb1.gz) 160 Kb LPC: Ligand-Protein Contacts for 1VRU CSU: Contacts of Structural Units for 1VRU Likely Quarternary Molecular Structure file(s) for 1VRU Retrieve 1VRU in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 1VRU from S2C, [Save to disk]

View 1VRU in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 1VRU

Ramachandran plot from PDBSum

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 1VRU, from MSDmotif at EBI Genome occurence of 1VRU's fold from GeneCensus Classification of representative domains in scop (Structural Classification of Proteins)     - Domain d1vrua2, region A:3-429 [Jmol] [rasmolscript] [script source]     - Domain d1vrua1, region A:430-539 [Jmol] [rasmolscript] [script source]     - Domain d1vrub_, region B [Jmol] [rasmolscript] [script source] Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH Summaries and structural analyses of PDB data files from PDBSum Identification of Protein Pockets & Cavities at CASTp

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1vru_B] [1vru] [1vru_A] SWISS-PROT database: [P04585] Domain organization of [POL_HV1H2] by SWISSPFAM

Other resources with information on 1VRU

Community annotation for 1VRU at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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