1RV0	Viral Protein	date	Dec 12, 2003
title	1930 Swine H1 Hemagglutinin Complexed With Lsta
authors	J.J.Skehel, S.J.Gamblin, L.F.Haire, R.J.Russell, D.J.Stevens, B.X N.Vasisht, D.A.Steinhauer, R.S.Daniels
compound		source
Molecule: Hemagglutinin Chain: H, J, L Other_details: Hemagglutinin Ha1 Chain		Organism_scientific: Influenza A Virus Organism_taxid: 11320 Strain: A-Swine-Iowa-30 Other_details: Bromelain Digested
Molecule: Hemagglutinin Chain: I, K, M Other_details: Hemagglutinin Ha2 Chain		Organism_scientific: Influenza A Virus Organism_taxid: 11320 Strain: A-Swine-Iowa-30 Other_details: Bromelain Digested
symmetry	Space Group: C 1 2 1	R_factor 0.214 R_Free 0.254
crystal cell	length a length b length c angle alpha angle beta angle gamma 202.040 82.940 176.880 90.00 105.86 90.00
method	X-Ray Diffraction	resolution	2.50 Å
ligand	DAN, NDG	enzyme
related structures	by homologous chain: 1RU7, 1RVT, 2VIU
Gene Ontology	Chain Function Process Component H, J, L M, K, I
Primary reference	The structure and receptor binding properties of the 1918 influenza hemagglutinin., Gamblin SJ, Haire LF, Russell RJ, Stevens DJ, Xiao B, Ha Y, Vasisht N, Steinhauer DA, Daniels RS, Elliot A, Wiley DC, Skehel JJ, Science 2004 Mar 19;303(5665):1838-42. Epub 2004 Feb 5. PMID:14764886

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (244 Kb) [Save to disk] Biological Unit Coordinates (1rv0.pdb1.gz) 239 Kb LPC: Ligand-Protein Contacts for 1RV0 CSU: Contacts of Structural Units for 1RV0 Likely Quarternary Molecular Structure file(s) for 1RV0 Retrieve 1RV0 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 1RV0 from S2C, [Save to disk]

View 1RV0 in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 1RV0

Ramachandran plot from PDBSum

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 1RV0, from MSDmotif at EBI Classification of representative domains in scop (Structural Classification of Proteins)     - Domain d1rv0h_, region H [Jmol] [rasmolscript] [script source]     - Domain d1rv0i_, region I [Jmol] [rasmolscript] [script source]     - Domain d1rv0j_, region J [Jmol] [rasmolscript] [script source]     - Domain d1rv0k_, region K [Jmol] [rasmolscript] [script source]     - Domain d1rv0l_, region L [Jmol] [rasmolscript] [script source]     - Domain d1rv0m_, region M [Jmol] [rasmolscript] [script source] Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH Summaries and structural analyses of PDB data files from PDBSum Identification of Protein Pockets & Cavities at CASTp

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1rv0_K] [1rv0] [1rv0_I] [1rv0_H] [1rv0_M] [1rv0_J] [1rv0_L] SWISS-PROT database: [Q82500] Domain organization of [Q82500_9INFA] by SWISSPFAM

Other resources with information on 1RV0

Community annotation for 1RV0 at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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