OCA Atlas for 1RXD

1RXD

date

authors

compound

source

symmetry

R_factor

R_Free

crystal
cell

length a	length b	length c	angle alpha	angle beta	angle gamma

method

X-Ray Diffraction

resolution

ligand

MSE

enzyme

related structures

by homologous chain: 1XM2

Gene
Ontology

Chain	Function	Process	Component
B, A, C	phosphoprotein phosphatase a... protein tyrosine phosphatase... protein tyrosine/serine/thre...

Primary reference

Structural genomics of protein phosphatases., Almo SC, Bonanno JB, Sauder JM, Emtage S, Dilorenzo TP, Malashkevich V, Wasserman SR, Swaminathan S, Eswaramoorthy S, Agarwal R, Kumaran D, Madegowda M, Ragumani S, Patskovsky Y, Alvarado J, Ramagopal UA, Faber-Barata J, Chance MR, Sali A, Fiser A, Zhang ZY, Lawrence DS, Burley SK, J Struct Funct Genomics. 2007 Sep;8(2-3):121-40. Epub 2007 Dec 5. PMID:18058037

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (83 Kb) [Save to disk]

Biological Unit Coordinates (1rxd.pdb1.gz) 27 Kb

Biological Unit Coordinates (1rxd.pdb2.gz) 28 Kb

Biological Unit Coordinates (1rxd.pdb3.gz) 27 Kb

LPC: Ligand-Protein Contacts for 1RXD

CSU: Contacts of Structural Units for 1RXD

Likely Quarternary Molecular Structure file(s) for 1RXD

Retrieve 1RXD in mmCIF format [Save to disk]

SEQRES to COORDINATES correlation for 1RXD from S2C, [Save to disk]

View 1RXD in 3D

Proteopedia, because life has more than 2D.

On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.

On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1rxd] [1rxd_A] [1rxd_B] [1rxd_C]

SWISS-PROT database: [Q93096]

Domain found in 1RXD: [PTPc_DSPc ] by SMART

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