1S80 Transferase date Jan 30, 2004
title Structure Of Serine Acetyltransferase From Haemophilis Influ
authors J.Gorman, A.Gogos, L.Shapiro, S.K.Burley, New York Sgx Research For Structural Genomics (Nysgxrc)
compound source
Molecule: Serine Acetyltransferase
Chain: A, B, C, D, E, F
Synonym: Sat
Ec: 2.3.1.30
Engineered: Yes
Organism_scientific: Haemophilus Influenzae
Organism_taxid: 727
Gene: Cyse, Hi0606
Expression_system: Escherichia Coli Bl21(De3)
Expression_system_taxid: 469008
Expression_system_strain: Bl21de3
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet26b
symmetry Space Group: C 2 2 21
R_factor 0.172 R_Free 0.219
crystal
cell
length a length b length c angle alpha angle beta angle gamma
129.963 209.670 136.569 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.70 Å
ligand MSE enzyme Transferase E.C.2.3.1.30 BRENDA
related structures by homologous chain: 1T3D
Gene
Ontology
ChainFunctionProcessComponent
F, A, D, C, E, B


Primary referenceStructure of serine acetyltransferase from Haemophilus influenzae Rd., Gorman J, Shapiro L, Acta Crystallogr D Biol Crystallogr. 2004 Sep;60(Pt 9):1600-5. Epub 2004, Aug 26. PMID:15333931
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (237 Kb) [Save to disk]
  • Biological Unit Coordinates (1s80.pdb1.gz) 225 Kb
  • LPC: Ligand-Protein Contacts for 1S80
  • CSU: Contacts of Structural Units for 1S80
  • Likely Quarternary Molecular Structure file(s) for 1S80
  • Structure Factors (414 Kb)
  • Retrieve 1S80 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1S80 from S2C, [Save to disk]
  • Re-refined 1s80 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 1S80 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1S80
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1S80, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1s80a_, region A [Jmol] [rasmolscript] [script source]
        - Domain d1s80b_, region B [Jmol] [rasmolscript] [script source]
        - Domain d1s80c_, region C [Jmol] [rasmolscript] [script source]
        - Domain d1s80d_, region D [Jmol] [rasmolscript] [script source]
        - Domain d1s80e_, region E [Jmol] [rasmolscript] [script source]
        - Domain d1s80f_, region F [Jmol] [rasmolscript] [script source]
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1s80_C] [1s80_B] [1s80] [1s80_E] [1s80_A] [1s80_D] [1s80_F]
  • SWISS-PROT database: [P43886]
  • Domain organization of [CYSE_HAEIN] by SWISSPFAM
  • Domain found in 1S80: [SATase_N ] by SMART
  • Other resources with information on 1S80
  • Community annotation for 1S80 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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