1S9Q crystal structure of the ligand-binding domain of the estrogen-related receptor gamma in complex with 4-hydroxytamoxifen date
authors Greschik, H., Flaig, R., Renaud, J.P., Moras, D.
compound source
symmetry
R_factor
R_Free 0.244
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 2.20
ligand CHD, OHT BindingDB enzyme
related structures by homologous chain: 1S9P, 1TFC
Primary referenceStructural basis for the deactivation of the estrogen-related receptor gamma by diethylstilbestrol or 4-hydroxytamoxifen and determinants of selectivity., Greschik H, Flaig R, Renaud JP, Moras D, J Biol Chem 2004 May 24;. PMID:15161930
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (79 Kb) [Save to disk]
  • Biological Unit Coordinates (1s9q.pdb1.gz) 73 Kb
  • Biological Unit Coordinates (1s9q.pdb2.gz) 144 Kb
  • LPC: Ligand-Protein Contacts for 1S9Q
  • CSU: Contacts of Structural Units for 1S9Q
  • Likely Quarternary Molecular Structure file(s) for 1S9Q
  • Structure Factors (266 Kb)
  • Retrieve 1S9Q in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1S9Q from S2C, [Save to disk]
  • Re-refined 1s9q structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 1S9Q in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 1S9Q
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1S9Q, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1s9qa_, region A [Jmol] [rasmolscript] [script source]
        - Domain d1s9qb_, region B [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1s9q] [1s9q_A] [1s9q_B]
  • SWISS-PROT database: [P62508]
  • Domain organization of [ERR3_HUMAN] by SWISSPFAM
  • Domain found in 1S9Q: [HOLI ] by SMART
    • Other resources with information on 1S9Q
  • Community annotation for 1S9Q at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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