1TFC Transcription date May 27, 2004
title Crystal Structure Of The Ligand-Binding Domain Of The Estrog Receptor Gamma In Complex With A Steroid Receptor Coactivat Peptide
authors H.Greschik, R.Flaig, J.P.Renaud, D.Moras
compound source
Molecule: Estrogen-Related Receptor Gamma
Chain: A, B
Fragment: Ligand-Binding Domain
Synonym: Estrogen Receptor Related Protein 3, Err Gamma-2
Engineered: Yes
Other_details: Complex With A Src1 Coactivator Peptide In T Of Ligand;
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Esrrg, Nr3b3, Errg2, Err3, Kiaa0832
Expression_system: Escherichia Coli Bl21(De3)
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De3)
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet-15b

Molecule: Steroid Receptor Coactivator-1
Chain: C, D
Fragment: Second Nr-Box
Synonym: Src-1; Nuclear Receptor Coactivator 1; Src-Ancoa-
Engineered: Yes

Synthetic: Yes
Other_details: Short Chemically Synthesized Portion Of Natu Occuring Steroid Receptor Coactivator-1
symmetry Space Group: P 43 21 2
R_factor 0.243 R_Free 0.258
length a length b length c angle alpha angle beta angle gamma
83.477 83.477 239.401 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.40 Å
related structures by homologous chain: 1S9Q, 1XB7
Primary referenceStructural basis for the deactivation of the estrogen-related receptor gamma by diethylstilbestrol or 4-hydroxytamoxifen and determinants of selectivity., Greschik H, Flaig R, Renaud JP, Moras D, J Biol Chem 2004 May 24;. PMID:15161930
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (81 Kb) [Save to disk]
  • Biological Unit Coordinates (1tfc.pdb1.gz) 76 Kb
  • CSU: Contacts of Structural Units for 1TFC
  • Likely Quarternary Molecular Structure file(s) for 1TFC
  • Structure Factors (255 Kb)
  • Retrieve 1TFC in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1TFC from S2C, [Save to disk]
  • Re-refined 1tfc structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 1TFC in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1TFC
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 1TFC, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1tfca_, region A [Jmol] [rasmolscript] [script source]
        - Domain d1tfcb_, region B [Jmol] [rasmolscript] [script source]
        - Domain d1tfcc_, region C [Jmol] [rasmolscript] [script source]
        - Domain d1tfcd_, region D [Jmol] [rasmolscript] [script source]
  • Fold representative 1tfc from FSSP and Dali (Families of Structurally Similar Proteins)
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1tfc] [1tfc_C] [1tfc_B] [1tfc_D] [1tfc_A]
  • SWISS-PROT database: [P62508] [Q15788]
  • Domain organization of [ERR3_HUMAN] [NCOA1_HUMAN] by SWISSPFAM
  • Domain found in 1TFC: [HOLI ] by SMART
  • Other resources with information on 1TFC
  • Community annotation for 1TFC at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

  • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014
    Bioinformatics Unit
    Weizmann Institute of Science