1SGG	Tyrosine-Protein Kinase	date	Jan 08, 1999
title	The Solution Structure Of Sam Domain From The Receptor Tyros Ephb2, Nmr, 10 Structures
authors	M.Smalla, P.Schmieder, M.Kelly, A.Ter Laak, G.Krause, L.Ball, M.Wa P.Bork, H.Oschkinat
compound		source
Molecule: Ephrin Type-B Receptor 2 Chain: A Fragment: Sam Domain Ec: 2.7.1.112 Engineered: Yes Other_details: Potential Tyrosine Phosphorylation At Y 25		Organism_scientific: Gallus Gallus Organism_common: Chicken Organism_taxid: 9031 Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_cell_line: Bl21 Expression_system_tissue: Embryo Expression_system_cellular_location: Cytoplasm Expression_system_plasmid: Pet 28d
method	Solution NMR
ligand		enzyme	Transferase E.C.2.7.1.112 BRENDA
related structures	by homologous chain: 1F0M
Primary reference	Solution structure of the receptor tyrosine kinase EphB2 SAM domain and identification of two distinct homotypic interaction sites., Smalla M, Schmieder P, Kelly M, Ter Laak A, Krause G, Ball L, Wahl M, Bork P, Oschkinat H, Protein Sci 1999 Oct;8(10):1954-61. PMID:10548040

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (179 Kb) [Save to disk] Biological Unit Coordinates (1sgg.pdb1.gz) 18 Kb CSU: Contacts of Structural Units for 1SGG Retrieve 1SGG in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 1SGG from S2C, [Save to disk]

View 1SGG in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 1SGG

Ramachandran plot from PDBSum

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 1SGG, from MSDmotif at EBI Classification of representative domains in scop (Structural Classification of Proteins)     - Domain d1sgg__, region [Jmol] [rasmolscript] [script source] Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH Summaries and structural analyses of PDB data files from PDBSum Identification of Protein Pockets & Cavities at CASTp

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1sgg_A] [1sgg] SWISS-PROT database: [P28693] Domain organization of [EPHB2_CHICK] by SWISSPFAM Domain found in 1SGG: [SAM ] by SMART

Other resources with information on 1SGG

Community annotation for 1SGG at PDBWiki (http://pdbwiki.org) NMR Ensemble (OLDERADO: core, domain and representative structure database) MMDB (Entrez's Structure Database)

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