1SIH Oxidoreductase date Feb 29, 2004
title Agao In Covalent Complex With The Inhibitor Moba ("4-(4- Methylphenoxy)-2-Butyn-1-Amine")
authors J.M.Guss, D.B.Langley, A.P.Duff
compound source
Molecule: Phenylethylamine Oxidase
Chain: A
Synonym: Amine Oxidase
Ec: 1.4.3.6
Engineered: Yes
Other_details: Agao Covalently Inhibited
Organism_scientific: Arthrobacter Globiformis
Organism_taxid: 1665
Gene: Atcc8010,Ifo12137
Expression_system: Escherichia Coli Bl21(De3)
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De3)
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pagao2
symmetry Space Group: C 1 2 1
R_factor 0.149 R_Free 0.168
crystal
cell
length a length b length c angle alpha angle beta angle gamma
157.645 62.787 91.657 90.00 112.18 90.00
method X-Ray Diffractionresolution 1.73 Å
ligand CU, GOL, MBQ, NA, SO4 enzyme Oxidoreductase E.C.1.4.3.6 BRENDA
related structures by homologous chain: 1IQY, 1SII
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceDifferential Inhibition of Six Copper Amine Oxidases by a Family of 4-(Aryloxy)-2-butynamines: Evidence for a New Mode of Inactivation., O'Connell KM, Langley DB, Shepard EM, Duff AP, Jeon HB, Sun G, Freeman HC, Guss JM, Sayre LM, Dooley DM, Biochemistry 2004 Aug 31;43(34):10965-10978. PMID:15323556
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (200 Kb) [Save to disk]
  • Biological Unit Coordinates (1sih.pdb1.gz) 384 Kb
  • LPC: Ligand-Protein Contacts for 1SIH
  • CSU: Contacts of Structural Units for 1SIH
  • Likely Quarternary Molecular Structure file(s) for 1SIH
  • Structure Factors (1137 Kb)
  • Retrieve 1SIH in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1SIH from S2C, [Save to disk]
  • Re-refined 1sih structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 1SIH in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1SIH
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1SIH, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1siha1, region A:212-628 [Jmol] [rasmolscript] [script source]
        - Domain d1siha2, region A:9-96 [Jmol] [rasmolscript] [script source]
        - Domain d1siha3, region A:97-211 [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1sih_A] [1sih]
  • SWISS-PROT database: [P46881]
  • Domain organization of [PAOX_ARTGO] by SWISSPFAM
  • Other resources with information on 1SIH
  • Community annotation for 1SIH at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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