1SJI Metal Binding Protein date Mar 03, 2004
title Comparing Skeletal And Cardiac Calsequestrin Structures And Calcium Binding: A Proposed Mechanism For Coupled Calcium B Protein Polymerization
authors H.J.Park, I.Y.Park, E.J.Kim, B.Youn, K.Fields, A.K.Dunker, C.H.Kan
compound source
Molecule: Calsequestrin, Cardiac Muscle Isoform
Chain: A, B
Synonym: Calsequestrin 2
Engineered: Yes
Organism_scientific: Canis Lupus Familiaris
Organism_common: Dog
Organism_taxid: 9615
Strain: Familiaris
Gene: Casq2
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Ptyb1
symmetry Space Group: I 4
R_factor 0.192 R_Free 0.241
crystal
cell
length a length b length c angle alpha angle beta angle gamma
145.188 145.188 99.820 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.40 Å
related structures by homologous chain: 1A8Y
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceComparing skeletal and cardiac calsequestrin structures and their calcium binding: a proposed mechanism for coupled calcium binding and protein polymerization., Park H, Park IY, Kim E, Youn B, Fields K, Dunker AK, Kang C, J Biol Chem 2004 Apr 23;279(17):18026-33. Epub 2004 Feb 10. PMID:14871888
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (121 Kb) [Save to disk]
  • Biological Unit Coordinates (1sji.pdb1.gz) 116 Kb
  • CSU: Contacts of Structural Units for 1SJI
  • Likely Quarternary Molecular Structure file(s) for 1SJI
  • Retrieve 1SJI in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1SJI from S2C, [Save to disk]
  • View 1SJI in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1SJI
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1SJI, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1sji] [1sji_A] [1sji_B]
  • SWISS-PROT database: [P12637]
  • Domain organization of [CASQ2_CANFA] by SWISSPFAM
  • Other resources with information on 1SJI
  • Community annotation for 1SJI at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

  • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022
    Bioinformatics Unit
    Weizmann Institute of Science