1SOX Oxidoreductase date Dec 31, 1997
title Sulfite Oxidase From Chicken Liver
authors C.Kisker, H.Schindelin, D.C.Rees
compound source
Molecule: Sulfite Oxidase
Chain: A, B
Ec: 1.8.3.1
Organism_scientific: Gallus Gallus
Organism_common: Chicken
Organism_taxid: 9031
Organ: Liver
Organelle: Mitochondrion
Cellular_location: Mitochondrial Intermembrane Space
symmetry Space Group: P 1 21 1
R_factor 0.175 R_Free 0.220
crystal
cell
length a length b length c angle alpha angle beta angle gamma
55.117 197.690 56.009 90.00 94.23 90.00
method X-Ray Diffractionresolution 1.90 Å
ligand EPE, GOL, HEM, MO, MTE, SO4 enzyme Oxidoreductase E.C.1.8.3.1 BRENDA
related structures by homologous chain: 1MJ4, 1T9F
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceMolecular basis of sulfite oxidase deficiency from the structure of sulfite oxidase., Kisker C, Schindelin H, Pacheco A, Wehbi WA, Garrett RM, Rajagopalan KV, Enemark JH, Rees DC, Cell 1997 Dec 26;91(7):973-83. PMID:9428520
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (173 Kb) [Save to disk]
  • Biological Unit Coordinates (1sox.pdb1.gz) 167 Kb
  • LPC: Ligand-Protein Contacts for 1SOX
  • CSU: Contacts of Structural Units for 1SOX
  • Likely Quarternary Molecular Structure file(s) for 1SOX
  • Retrieve 1SOX in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1SOX from S2C, [Save to disk]
  • View 1SOX in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1SOX
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 1SOX, from MSDmotif at EBI
  • Genome occurence of 1SOX's fold from GeneCensus
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1soxa2, region A:3-93 [Jmol] [rasmolscript] [script source]
        - Domain d1soxa1, region A:344-466 [Jmol] [rasmolscript] [script source]
        - Domain d1soxa3, region A:94-343 [Jmol] [rasmolscript] [script source]
        - Domain d1soxb2, region B:3-93 [Jmol] [rasmolscript] [script source]
        - Domain d1soxb1, region B:344-466 [Jmol] [rasmolscript] [script source]
        - Domain d1soxb3, region B:94-343 [Jmol] [rasmolscript] [script source]
  • Fold representative 1sox from FSSP and Dali (Families of Structurally Similar Proteins)
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1sox_A] [1sox_B] [1sox]
  • SWISS-PROT database: [P07850]
  • Domain organization of [SUOX_CHICK] by SWISSPFAM
  • Domain found in 1SOX: [Cyt-b5 ] by SMART
  • Other resources with information on 1SOX
  • Community annotation for 1SOX at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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