1SVT	Chaperone	date	Mar 29, 2004
title	Crystal Structure Of Groel14-Groes7-(Adp-Alfx)7
authors	C.Chaudhry, A.L.Horwich, A.T.Brunger, P.D.Adams
compound		source
Molecule: Groel Protein Chain: A, B, C, D, E, F, G, H, I, J, K, L, M, N Synonym: Protein Cpn60, 60 Kda Chaperonin Engineered: Yes		Organism_scientific: Escherichia Coli Organism_taxid: 562 Gene: Grol, Groel, Mopa, B4143, C5227, Z5748, Ecs5124, Sf42 S4564; Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_strain: Dh5 Alpha
Molecule: Groes Protein Chain: O, P, Q, R, S, T, U Synonym: Protein Cpn10, 10 Kda Chaperonin Engineered: Yes		Organism_scientific: Escherichia Coli Organism_taxid: 562 Gene: Gros, Groes, Mopb, B4142, C5226, Z5747, Ecs5123, Sf42 S4563; Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_strain: Dh5 Alpha
symmetry	Space Group: P 21 21 2	R_factor 0.247 R_Free 0.274
crystal cell	length a length b length c angle alpha angle beta angle gamma 255.546 266.855 187.049 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	2.81 Å
ligand	ADP, AF3, K, MG	enzyme
note	1SVT is a representative structure
related structures	by homologous chain: 1PCQ, 1WF4
Gene Ontology	Chain Function Process Component F, N, K, E, M, C, L, A, J, B, H, D, I, G S, T, Q, O, P, R, U
Primary reference	Exploring the structural dynamics of the E.coli chaperonin GroEL using translation-libration-screw crystallographic refinement of intermediate states., Chaudhry C, Horwich AL, Brunger AT, Adams PD, J Mol Biol 2004 Sep 3;342(1):229-45. PMID:15313620

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (1103 Kb) [Save to disk] Biological Unit Coordinates (1svt.pdb1.gz) 1083 Kb LPC: Ligand-Protein Contacts for 1SVT CSU: Contacts of Structural Units for 1SVT Likely Quarternary Molecular Structure file(s) for 1SVT Structure Factors (3134 Kb) Retrieve 1SVT in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 1SVT from S2C, [Save to disk] Re-refined 1svt structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 1SVT in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 1SVT

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 1SVT, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1svt_T] [1svt_L] [1svt_B] [1svt_C] [1svt_F] [1svt_Q] [1svt_E] [1svt_U] [1svt_M] [1svt_P] [1svt_A] [1svt_H] [1svt_J] [1svt_R] [1svt_N] [1svt_I] [1svt_G] [1svt_S] [1svt_K] [1svt] [1svt_D] [1svt_O] SWISS-PROT database: [P0A6F9] [P0A6F5] Domain organization of [CH10_ECOLI] [CH60_ECOLI] by SWISSPFAM Domain found in 1SVT: [Cpn10 ] by SMART

Other resources with information on 1SVT

Community annotation for 1SVT at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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