1T5B	Hydrolase	date	May 03, 2004
title	Structural Genomics, A Protein From Salmonella Typhimurium S E. Coli Acyl Carrier Protein Phosphodiesterase
authors	R.Zhang, R.Wu, F.Collart, A.Joachimiak, Midwest Center For Struc Genomics (Mcsg)
compound		source
Molecule: Acyl Carrier Protein Phosphodiesterase Chain: A, B Synonym: Acp Phosphodiesterase Ec: 3.1.4.14 Engineered: Yes		Organism_scientific: Salmonella Typhimurium Organism_taxid: 602 Atcc: 700720 Gene: Acpd, Stm1642, Sty1427, T1545 Expression_system: Escherichia Coli Bl21 Expression_system_taxid: 511693 Expression_system_strain: Bl21 Expression_system_vector_type: Plasmid Expression_system_plasmid: Pdm68
symmetry	Space Group: P 1 21 1	R_factor 0.196 R_Free 0.223
crystal cell	length a length b length c angle alpha angle beta angle gamma 40.891 107.915 51.168 90.00 111.45 90.00
method	X-Ray Diffraction	resolution	1.40 Å
ligand	FMN	enzyme	Hydrolase E.C.3.1.4.14 BRENDA
related structures	by homologous chain: 1V4B
Gene Ontology	Chain Function Process Component A, B electron transfer activity

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (73 Kb) [Save to disk] Biological Unit Coordinates (1t5b.pdb1.gz) 69 Kb LPC: Ligand-Protein Contacts for 1T5B CSU: Contacts of Structural Units for 1T5B Likely Quarternary Molecular Structure file(s) for 1T5B Structure Factors (1194 Kb) Retrieve 1T5B in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 1T5B from S2C, [Save to disk] Re-refined 1t5b structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 1T5B in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 1T5B

Ramachandran plot from PDBSum

Structure-derived information

Conformational Epitope Prediction for 1T5B 1T5BA 1T5BB from the CEP Server. Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 1T5B, from MSDmotif at EBI Classification of representative domains in scop (Structural Classification of Proteins)     - Domain d1t5ba_, region A [Jmol] [rasmolscript] [script source]     - Domain d1t5bb_, region B [Jmol] [rasmolscript] [script source]

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1t5b] [1t5b_A] [1t5b_B] SWISS-PROT database: [P63462] Domain organization of [AZOR_SALTY] by SWISSPFAM

Other resources with information on 1T5B

Community annotation for 1T5B at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

Movements, Movies and Images

Images from IMB Jena Image Library of Biological Macromolecules.

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