1THM Hydrolase(Serine Protease) date Feb 24, 1992
title Crystal Structure Of Thermitase At 1.4 Angstroms Resolution
authors A.V.Teplyakov, I.P.Kuranova, E.H.Harutyunyan
compound source
Molecule: Thermitase
Chain: A
Ec: 3.4.21.66
Engineered: Yes
 Organism_scientific: Thermoactinomyces Vulgaris
Organism_taxid: 2026
symmetry Space Group: P 21 21 21
R_factor
R_Free NULL
crystal
cell
length a length b length c angle alpha angle beta angle gamma
72.950 64.050 47.550 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.37 Å
ligand CA, NA, SO4 enzyme Hydrolase E.C.3.4.21.66 BRENDA
related structures by homologous chain: 2TEC
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceCrystal structure of thermitase at 1.4 A resolution., Teplyakov AV, Kuranova IP, Harutyunyan EH, Vainshtein BK, Frommel C, Hohne WE, Wilson KS, J Mol Biol 1990 Jul 5;214(1):261-79. PMID:2196375
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (49 Kb) [Save to disk]
  • Biological Unit Coordinates (1thm.pdb1.gz) 44 Kb
  • LPC: Ligand-Protein Contacts for 1THM
  • CSU: Contacts of Structural Units for 1THM
  • Likely Quarternary Molecular Structure file(s) for 1THM
  • Retrieve 1THM in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1THM from S2C, [Save to disk]
    • View 1THM in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 1THM
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Conformational Epitope Prediction for 1THM from the CEP Server.
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1THM, from MSDmotif at EBI
  • Genome occurence of 1THM's fold from GeneCensus
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1thm__, region [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1thm_A] [1thm]
  • SWISS-PROT database: [P04072]
  • Domain organization of [THET_THEVU] by SWISSPFAM
    • Other resources with information on 1THM
  • Community annotation for 1THM at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Domain movements in 1THM from the Database of Macromolecular Movements.
  • Images from IMB Jena Image Library of Biological Macromolecules.

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