1TVS Transcription Regulation date Sep 14, 1994
title Trifluoroethanol Stabilizes A Helix-Turn-Helix Motif In Equi Infectious-Anemia-Virus Trans-Activator Protein
authors P.Roesch, H.Sticht
compound source
Molecule: Transactivator Protein
Chain: A
Engineered: Yes
 Organism_scientific: Equine Infectious Anemia Virus
Organism_taxid: 11665
Gene: Potential
methodSolution NMR
related structures by homologous chain: 1TVT
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceTrifluoroethanol stabilizes a helix-turn-helix motif in equine infectious-anemia-virus trans-activator protein., Sticht H, Willbold D, Ejchart A, Rosin-Arbesfeld R, Yaniv A, Gazit A, Rosch P, Eur J Biochem 1994 Nov 1;225(3):855-61. PMID:7957222
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (163 Kb) [Save to disk]
  • Biological Unit Coordinates (1tvs.pdb1.gz) 21 Kb
  • CSU: Contacts of Structural Units for 1TVS
  • Retrieve 1TVS in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1TVS from S2C, [Save to disk]
    • View 1TVS in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 1TVS
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1TVS, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1tvs__, region [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1tvs_A] [1tvs]
  • SWISS-PROT database: [O89467]
  • Domain organization of [O89467_9RETR] by SWISSPFAM
    • Other resources with information on 1TVS
  • Community annotation for 1TVS at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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