1TVT Transcription Regulation date Jul 07, 1994
title Structure Of The Equine Infectious Anemia Virus Tat Protein
authors P.Roesch, D.Willbold
compound source
Molecule: Transactivator Protein
Chain: A
Engineered: Yes
 Organism_scientific: Equine Infectious Anemia Virus
Organism_taxid: 11665
Cell_line: Bl21
Gene: Potential
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Bl21
methodSolution NMR
related structures by homologous chain: 1TVS
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceStructure of the equine infectious anemia virus Tat protein., Willbold D, Rosin-Arbesfeld R, Sticht H, Frank R, Rosch P, Science 1994 Jun 10;264(5165):1584-7. PMID:7515512
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (123 Kb) [Save to disk]
  • Biological Unit Coordinates (1tvt.pdb1.gz) 20 Kb
  • CSU: Contacts of Structural Units for 1TVT
  • Retrieve 1TVT in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1TVT from S2C, [Save to disk]
    • View 1TVT in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 1TVT
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1TVT, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1tvt__, region [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1tvt] [1tvt_A]
  • SWISS-PROT database: [O89467]
  • Domain organization of [O89467_9RETR] by SWISSPFAM
    • Other resources with information on 1TVT
  • Community annotation for 1TVT at PDBWiki (http://pdbwiki.org)
  • NMR Ensemble (OLDERADO: core, domain and representative structure database)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Domain movements in 1TVT from the Database of Macromolecular Movements.
  • Images from IMB Jena Image Library of Biological Macromolecules.

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