1U0N The ternary von Willebrand Factor A1-glycoprotein Ibalpha-botrocetin complex date
authors Fukuda, K., Liddington, R.C.
compound source
symmetry
R_factor
R_Free 0.276
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 2.95
related structures by homologous chain: 1GWB, 1U0O, 1UEX
Gene
Ontology
ChainFunctionProcessComponent
C, B
  • toxin activity


    • Primary referenceThe snake venom protein botrocetin acts as a biological brace to promote dysfunctional platelet aggregation., Fukuda K, Doggett T, Laurenzi IJ, Liddington RC, Diacovo TG, Nat Struct Mol Biol 2005 Feb;12(2):152-9. Epub 2005 Jan 16. PMID:15665869
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (124 Kb) [Save to disk]
  • Biological Unit Coordinates (1u0n.pdb1.gz) 116 Kb
  • CSU: Contacts of Structural Units for 1U0N
  • Likely Quarternary Molecular Structure file(s) for 1U0N
  • Retrieve 1U0N in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1U0N from S2C, [Save to disk]
    • View 1U0N in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 1U0N
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1U0N, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1u0n_B] [1u0n_D] [1u0n_C] [1u0n] [1u0n_A]
  • SWISS-PROT database: [P22029] [P22030] [P07359] [P04275]
  • Domain organization of [BOTA_BOTJA] [BOTB_BOTJA] [GP1BA_HUMAN] [VWF_HUMAN] by SWISSPFAM
  • Domains found in 1U0N: [CLECT] [LRR] [LRRCT] [LRRNT] [LRR_TYP] [VWA ] by SMART
    • Other resources with information on 1U0N
  • Community annotation for 1U0N at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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