1UEA Complex (Metalloprotease Inhibitor) date Jun 06, 1997
title Mmp-3timp-1 Complex
authors W.Bode, K.Maskos, F.X.Gomis-Rueth, H.Nagase
compound source
Molecule: Matrix Metalloproteinase-3
Chain: A, C
Fragment: Catalytic Domain
Synonym: Mmp-3 Is Identical With Stromelysin 1
Ec: 3.4.24.17
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: B834 (De3)
Expression_system_plasmid: Pet3a-Prommp-3(Dc)
Other_details: Substitution Of Met By Selenomet

Molecule: Tissue Inhibitor Of Metalloproteinase-1
Chain: B, D
Synonym: Timp-1
Engineered: Yes
Other_details: Timps Are Protein Inhibitors Of Mmps

Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Expression_system: Cricetulus Griseus
Expression_system_common: Chinese Hamster
Expression_system_taxid: 10029
Expression_system_variant: Cho
Expression_system_plasmid: Pee14-Timp-1
Other_details: Unglycosylated
symmetry Space Group: P 43
R_factor 0.197 R_Free NULL
crystal
cell
length a length b length c angle alpha angle beta angle gamma
80.620 80.620 157.620 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.80 Å
ligand CA, MSE, ZN enzyme Hydrolase E.C.3.4.24.17 BRENDA
related structures by homologous chain: 1D2B, 1D5J
Gene
Ontology
ChainFunctionProcessComponent
A, C


D, B


Primary referenceMechanism of inhibition of the human matrix metalloproteinase stromelysin-1 by TIMP-1., Gomis-Ruth FX, Maskos K, Betz M, Bergner A, Huber R, Suzuki K, Yoshida N, Nagase H, Brew K, Bourenkov GP, Bartunik H, Bode W, Nature 1997 Sep 4;389(6646):77-81. PMID:9288970
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (133 Kb) [Save to disk]
  • Biological Unit Coordinates (1uea.pdb1.gz) 64 Kb
  • Biological Unit Coordinates (1uea.pdb2.gz) 64 Kb
  • LPC: Ligand-Protein Contacts for 1UEA
  • CSU: Contacts of Structural Units for 1UEA
  • Likely Quarternary Molecular Structure file(s) for 1UEA
  • Retrieve 1UEA in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1UEA from S2C, [Save to disk]
  • View 1UEA in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1UEA
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 1UEA, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1ueaa_, region A [Jmol] [rasmolscript] [script source]
        - Domain d1ueab_, region B [Jmol] [rasmolscript] [script source]
        - Domain d1ueac_, region C [Jmol] [rasmolscript] [script source]
        - Domain d1uead_, region D [Jmol] [rasmolscript] [script source]
  • Fold representative 1uea from FSSP and Dali (Families of Structurally Similar Proteins)
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1uea_D] [1uea_B] [1uea_C] [1uea_A] [1uea]
  • SWISS-PROT database: [P08254] [P01033]
  • Domain organization of [MMP3_HUMAN] [TIMP1_HUMAN] by SWISSPFAM
  • Domains found in 1UEA: [NTR] [ZnMc ] by SMART
  • Other resources with information on 1UEA
  • Community annotation for 1UEA at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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