1UGH	Glycosylase	date	Feb 05, 1999
title	Crystal Structure Of Human Uracil-Dna Glycosylase In Complex Protein Inhibitor: Protein Mimicry Of Dna
authors	C.D.Mol, A.S.Arvai, R.J.Sanderson, G.Slupphaug, B.Kavli, H.E.Krok D.W.Mosbaugh, J.A.Tainer
compound		source
Molecule: Protein (Uracil-Dna Glycosylase) Chain: E Synonym: Udg Ec: 3.2.2.3 Engineered: Yes Mutation: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Expression_system: Escherichia Coli Expression_system_taxid: 562
Molecule: Protein (Uracil-Dna Glycosylase Inhibitor) Chain: I Synonym: Ugi Engineered: Yes		Organism_scientific: Bacillus Phage Pbs2 Organism_taxid: 10684 Expression_system: Escherichia Coli Expression_system_taxid: 562
symmetry	Space Group: P 1 21 1	R_factor 0.198 R_Free 0.255
crystal cell	length a length b length c angle alpha angle beta angle gamma 48.320 64.690 55.340 90.00 113.77 90.00
method	X-Ray Diffraction	resolution	1.90 Å
ligand		enzyme	Hydrolase E.C.3.2.2.3 BRENDA
related structures	by homologous chain: 1SSP, 1UGI, 1YUO, 2UGI
Gene Ontology	Chain Function Process Component E I
Primary reference	Crystal structure of human uracil-DNA glycosylase in complex with a protein inhibitor: protein mimicry of DNA., Mol CD, Arvai AS, Sanderson RJ, Slupphaug G, Kavli B, Krokan HE, Mosbaugh DW, Tainer JA, Cell 1995 Sep 8;82(5):701-8. PMID:7671300

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (57 Kb) [Save to disk] Biological Unit Coordinates (1ugh.pdb1.gz) 54 Kb CSU: Contacts of Structural Units for 1UGH Likely Quarternary Molecular Structure file(s) for 1UGH Structure Factors (214 Kb) Retrieve 1UGH in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 1UGH from S2C, [Save to disk] Re-refined 1ugh structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 1UGH in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 1UGH

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 1UGH, from MSDmotif at EBI Classification of representative domains in scop (Structural Classification of Proteins)     - Domain d1ughe_, region E [Jmol] [rasmolscript] [script source]     - Domain d1ughi_, region I [Jmol] [rasmolscript] [script source] Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH Summaries and structural analyses of PDB data files from PDBSum Identification of Protein Pockets & Cavities at CASTp

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1ugh] [1ugh_E] [1ugh_I] SWISS-PROT database: [P14739] [P13051] Domain organization of [UNGI_BPPB2] [UNG_HUMAN] by SWISSPFAM Domains found in 1UGH: [UDG] [UreE_C ] by SMART

Other resources with information on 1UGH

Community annotation for 1UGH at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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