1UWA Lyase date Feb 03, 2004
title L290f Mutant Rubisco From Chlamydomonas
authors S.Karkehabadi, T.C.Taylor, R.J.Spreitzer, I.Andersson
compound source
Molecule: Ribulose Bisphosphate Carboxylase Large Chain
Chain: A, B, E, H, K, O, R, V
Synonym: Rubisco Large Subunit, Ribulose-1,5 Bisphosphate C Large Chain;
Ec: 4.1.1.39
Mutation: Yes
Organism_scientific: Chlamydomonas Reinhardtii
Organism_taxid: 3055

Molecule: Ribulose Bisphosphate Carboxylase Small Chain 1
Chain: C, F, I, J, M, P, T, W
Synonym: Rubisco Small Subunit 1
Ec: 4.1.1.39

Organism_scientific: Chlamydomonas Reinhardtii
Organism_taxid: 3055
symmetry Space Group: P 1 21 1
R_factor 0.171 R_Free 0.205
crystal
cell
length a length b length c angle alpha angle beta angle gamma
120.983 177.709 122.663 90.00 117.70 90.00
method X-Ray Diffractionresolution 2.30 Å
ligand CAP, EDO, HYP, KCX, MG, SMC enzyme Lyase E.C.4.1.1.39 BRENDA
related structures by homologous chain: 1RBO, 1UPM, 1UZH
Gene
Ontology
ChainFunctionProcessComponent
H, A, O, R, K, E, B, V


Primary referenceAltered intersubunit interactions in crystal structures of catalytically compromised ribulose-1,5-bisphosphate carboxylase/oxygenase., Karkehabadi S, Taylor TC, Spreitzer RJ, Andersson I, Biochemistry. 2005 Jan 11;44(1):113-20. PMID:15628851
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (817 Kb) [Save to disk]
  • Biological Unit Coordinates (1uwa.pdb1.gz) 804 Kb
  • LPC: Ligand-Protein Contacts for 1UWA
  • CSU: Contacts of Structural Units for 1UWA
  • Likely Quarternary Molecular Structure file(s) for 1UWA
  • Structure Factors (2029 Kb)
  • Retrieve 1UWA in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1UWA from S2C, [Save to disk]
  • Re-refined 1uwa structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 1UWA in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1UWA
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1UWA, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1uwa_A] [1uwa_O] [1uwa] [1uwa_V] [1uwa_M] [1uwa_W] [1uwa_J] [1uwa_P] [1uwa_E] [1uwa_F] [1uwa_H] [1uwa_C] [1uwa_R] [1uwa_B] [1uwa_K] [1uwa_I] [1uwa_T]
  • SWISS-PROT database: [P00877] [P00873]
  • Domain organization of [RBL_CHLRE] [RBS1_CHLRE] by SWISSPFAM
  • Domain found in 1UWA: [RuBisCO_small ] by SMART
  • Other resources with information on 1UWA
  • Community annotation for 1UWA at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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