1UZH	Lyase	date	Mar 12, 2004
title	A Chimeric Chlamydomonas, Synechococcus Rubisco Enzyme
authors	S.Karkehabadi, R.J.Spreitzer, I.Andersson
compound		source
Molecule: Ribulose Bisphosphate Carboxylase Large Chain Chain: A, B, E, H, K, O, R, V Synonym: Rubisco Large Subunit, Ribulose-1,5 Bisphosphate C Large Chain; Ec: 4.1.1.39 Engineered: Yes		Organism_scientific: Chlamydomonas Reinhardtii, Synechococc Organism_taxid: 3055, 1131 Expression_system: Chlamydomonas Reinhardtii, Synechococcus Expression_system_taxid: 3055, 1131
Molecule: Ribulose Bisphosphate Carboxylase Small Chain 2, Bisphosphate Carboxylase Small Chain; Chain: C, F, I, J, M, P, T, W Synonym: Rubisco Small Subunit 1,Chloroplast, Rubisco Small 2,Oxygenase, Ribulose-1,5 Bisphosphate Carboxylaseoxygenas Ec: 4.1.1.39 Engineered: Yes Other_details: Loop Ba-Bb Of Small Subunit Chlamydomonas Ru Residues E47 - R71 Has Been Replaced With The Corresponding Synechococcuss, Residues H47 - F53		Organism_scientific: Chlamydomonas Reinhardtii Organism_taxid: 3055 Expression_system: Chlamydomonas Reinhardtii Expression_system_taxid: 3055
symmetry	Space Group: P 21 21 2	R_factor 0.160 R_Free 0.193
crystal cell	length a length b length c angle alpha angle beta angle gamma 220.820 223.969 111.752 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	2.20 Å
ligand	CAP, EDO, HYP, KCX, MG, SMC	enzyme	Lyase E.C.4.1.1.39 BRENDA
related structures	by homologous chain: 1RBL, 1UW9, 1UWA
Gene Ontology	Chain Function Process Component H, A, O, R, K, E, B, V
Primary reference	Chimeric small subunits influence catalysis without causing global conformational changes in the crystal structure of ribulose-1,5-bisphosphate carboxylase/oxygenase., Karkehabadi S, Peddi SR, Anwaruzzaman M, Taylor TC, Cederlund A, Genkov T, Andersson I, Spreitzer RJ, Biochemistry. 2005 Jul 26;44(29):9851-61. PMID:16026157

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (806 Kb) [Save to disk] Biological Unit Coordinates (1uzh.pdb1.gz) 792 Kb LPC: Ligand-Protein Contacts for 1UZH CSU: Contacts of Structural Units for 1UZH Likely Quarternary Molecular Structure file(s) for 1UZH Structure Factors (2130 Kb) Retrieve 1UZH in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 1UZH from S2C, [Save to disk] Re-refined 1uzh structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 1UZH in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 1UZH

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 1UZH, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1uzh_E] [1uzh_F] [1uzh_B] [1uzh] [1uzh_P] [1uzh_T] [1uzh_I] [1uzh_A] [1uzh_R] [1uzh_W] [1uzh_O] [1uzh_V] [1uzh_H] [1uzh_C] [1uzh_J] [1uzh_K] [1uzh_M] SWISS-PROT database: [P00877] Domain organization of [RBL_CHLRE] by SWISSPFAM Domain found in 1UZH: [RuBisCO_small ] by SMART

Other resources with information on 1UZH

Community annotation for 1UZH at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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Images from IMB Jena Image Library of Biological Macromolecules.

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