1VKG		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
ligand	CRI, NA, ZN	enzyme
related structures	by homologous chain: 1T64, 1T67
Gene Ontology	Chain Function Process Component A, B
Primary reference	Structural Snapshots of Human HDAC8 Provide Insights into the Class I Histone Deacetylases., Somoza JR, Skene RJ, Katz BA, Mol C, Ho JD, Jennings AJ, Luong C, Arvai A, Buggy JJ, Chi E, Tang J, Sang BC, Verner E, Wynands R, Leahy EM, Dougan DR, Snell G, Navre M, Knuth MW, Swanson RV, McRee DE, Tari LW, Structure (Camb) 2004 Jul;12(7):1325-34. PMID:15242608

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (235 Kb) [Save to disk] Biological Unit Coordinates (1vkg.pdb1.gz) 227 Kb LPC: Ligand-Protein Contacts for 1VKG CSU: Contacts of Structural Units for 1VKG Likely Quarternary Molecular Structure file(s) for 1VKG Structure Factors (173 Kb) Retrieve 1VKG in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 1VKG from S2C, [Save to disk] Re-refined 1vkg structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 1VKG in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1vkg] [1vkg_A] [1vkg_B] SWISS-PROT database: [Q9BY41]

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