1VYB		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
ligand	GOL, SO3, SO4	enzyme
Primary reference	Crystal structure of the targeting endonuclease of the human LINE-1 retrotransposon., Weichenrieder O, Repanas K, Perrakis A, Structure. 2004 Jun;12(6):975-86. PMID:15274918

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (89 Kb) [Save to disk] Biological Unit Coordinates (1vyb.pdb1.gz) 43 Kb Biological Unit Coordinates (1vyb.pdb2.gz) 43 Kb LPC: Ligand-Protein Contacts for 1VYB CSU: Contacts of Structural Units for 1VYB Likely Quarternary Molecular Structure file(s) for 1VYB Structure Factors (339 Kb) Retrieve 1VYB in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 1VYB from S2C, [Save to disk] Re-refined 1vyb structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 1VYB in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1vyb] [1vyb_A] [1vyb_B] SWISS-PROT database: [Q8TE30]

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