1W6Z Hydrolase date Aug 25, 2004
title High Energy Tetragonal Lysozyme X-Ray Structure
authors J.Jakoncic, M.Aslantas, V.Honkimaki, M.Di Michiel, V.Stojanoff
compound source
Molecule: Lysozyme C
Chain: A
Synonym: Hewl, 1,4-Beta-N-Acetylmuramidase C, Allergen Gal Iv;
Ec: 3.2.1.17
 Organism_scientific: Gallus Gallus
Organism_common: Chicken
Organism_taxid: 9031
symmetry Space Group: P 43 21 2
R_factor 0.197 R_Free 0.226
crystal
cell
length a length b length c angle alpha angle beta angle gamma
77.453 77.453 37.183 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.65 Å
ligand CL, HO3 enzyme Hydrolase E.C.3.2.1.17 BRENDA
related structures by homologous chain: 1DPX, 1TEW
Gene
Ontology
ChainFunctionProcessComponent
A


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (31 Kb) [Save to disk]
  • Biological Unit Coordinates (1w6z.pdb1.gz) 23 Kb
  • LPC: Ligand-Protein Contacts for 1W6Z
  • CSU: Contacts of Structural Units for 1W6Z
  • Likely Quarternary Molecular Structure file(s) for 1W6Z
  • Retrieve 1W6Z in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1W6Z from S2C, [Save to disk]
    • View 1W6Z in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 1W6Z
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1W6Z, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1w6za_, region A [Jmol] [rasmolscript] [script source]
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1w6z] [1w6z_A]
  • SWISS-PROT database: [P00698]
  • Domain organization of [LYSC_CHICK] by SWISSPFAM
  • Domain found in 1W6Z: [LYZ1 ] by SMART
    • Other resources with information on 1W6Z
  • Community annotation for 1W6Z at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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