OCA Atlas for 1WM4

1WM4

Protein Binding

date

Jul 03, 2004

title

Solution Structure Of Mouse Coactosin, An Actin Filament Bin Protein

authors

M.Hellman, V.O.Paavilainen, P.Naumanen, P.Lappalainen, A.Annila,

compound

source

Molecule: Coactosin-Like Protein
Chain: A
Engineered: Yes

Organism_scientific: Mus Musculus
Organism_common: House Mouse
Organism_taxid: 10090
Expression_system: Escherichia Coli Bl21(De3)
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De3)
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Prat4

method

Solution NMR

related structures

by homologous chain: 1UDM, 1WNJ

Gene
Ontology

Chain	Function	Process	Component
A

Primary reference

Solution structure of coactosin reveals structural homology to ADF/cofilin family proteins., Hellman M, Paavilainen VO, Naumanen P, Lappalainen P, Annila A, Permi P, FEBS Lett 2004 Oct 8;576(1-2):91-6. PMID:15474017

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (558 Kb) [Save to disk]

Biological Unit Coordinates (1wm4.pdb1.gz) 37 Kb

CSU: Contacts of Structural Units for 1WM4

Experimental data, such as chemical shifts, at BioMagResBank (BMRB)

NMR Restraints Grid from BioMagResBank (BMRB)

Retrieve 1WM4 in mmCIF format [Save to disk]

SEQRES to COORDINATES correlation for 1WM4 from S2C, [Save to disk]

View 1WM4 in 3D

Proteopedia, because life has more than 2D.

On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.

On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 1WM4

Ramachandran plot from PDBSum

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

3D motif for 1WM4, from MSDmotif at EBI

Classification of representative domains in scop (Structural Classification of Proteins)
- Domain d1wm4a_, region A [Jmol] [rasmolscript] [script source]

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1wm4] [1wm4_A]

SWISS-PROT database: [Q9CQI6]

Domain organization of [COTL1_MOUSE] by SWISSPFAM

Domain found in 1WM4: [ADF ] by SMART

Other resources with information on 1WM4

Community annotation for 1WM4 at PDBWiki (http://pdbwiki.org)

NMR Ensemble (OLDERADO: core, domain and representative structure database)

MMDB (Entrez's Structure Database)

Movements, Movies and Images

Images from IMB Jena Image Library of Biological Macromolecules.

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