1WRB	Hydrolase	date	Oct 14, 2004
title	Crystal Structure Of The N-Terminal Reca-Like Domain Of Djvl Pranarian Vasa-Like Rna Helicase
authors	K.Kurimoto, Y.Muto, N.Obayashi, T.Terada, M.Shirouzu, T.Yabuki, M. E.Seki, T.Matsuda, T.Kigawa, H.Okumura, A.Tanaka, N.Shibata, M.Ka K.Agata, S.Yokoyama, Riken Structural Genomicsproteomics Ini (Rsgi)
compound		source
Molecule: Djvlgb Chain: A, B Fragment: N-Terminal Reca-Like Domain Engineered: Yes		Organism_scientific: Dugesia Japonica Organism_taxid: 6161 Other_details: E.Coli Cell Free System
symmetry	Space Group: P 41 21 2	R_factor 0.241 R_Free 0.282
crystal cell	length a length b length c angle alpha angle beta angle gamma 138.242 138.242 47.508 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	2.40 Å
ligand	SO4	enzyme
Gene Ontology	Chain Function Process Component A, B
Primary reference	Crystal structure of the N-terminal RecA-like domain of a DEAD-box RNA helicase, the Dugesia japonica vasa-like gene B protein., Kurimoto K, Muto Y, Obayashi N, Terada T, Shirouzu M, Yabuki T, Aoki M, Seki E, Matsuda T, Kigawa T, Okumura H, Tanaka A, Shibata N, Kashikawa M, Agata K, Yokoyama S, J Struct Biol 2005 Apr;150(1):58-68. PMID:15797730

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (82 Kb) [Save to disk] Biological Unit Coordinates (1wrb.pdb1.gz) 40 Kb Biological Unit Coordinates (1wrb.pdb2.gz) 39 Kb Biological Unit Coordinates (1wrb.pdb3.gz) 77 Kb LPC: Ligand-Protein Contacts for 1WRB CSU: Contacts of Structural Units for 1WRB Likely Quarternary Molecular Structure file(s) for 1WRB Retrieve 1WRB in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 1WRB from S2C, [Save to disk]

View 1WRB in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 1WRB

Ramachandran plot from PDBSum

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 1WRB, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1wrb_B] [1wrb_A] [1wrb] SWISS-PROT database: [O97032] Domain organization of [O97032_DUGJA] by SWISSPFAM Domain found in 1WRB: [DEXDc ] by SMART

Other resources with information on 1WRB

Community annotation for 1WRB at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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