1X47 Rna Binding Protein date May 14, 2005
title Solution Structure Of Dsrm Domain In Dgcr8 Protein
authors F.He, Y.Muto, M.Inoue, T.Kigawa, M.Shirouzu, T.Terada, S.Yokoyama, Riken Structural Genomicsproteomics Initiative (Rsgi)
compound source
Molecule: Dgcr8 Protein
Chain: A
Fragment: Dsrm Domain
Synonym: Digeorge Syndrome Critical Region 8
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Dgcr8, Dgcrk6
Expression_system_vector_type: Plasmid
Expression_system_plasmid: P040223-57
Other_details: Cell Free Protein Synthesis
methodSolution NMR

Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (487 Kb) [Save to disk]
  • CSU: Contacts of Structural Units for 1X47
  • Original NMR restraints for 1X47 from PDB
  • Retrieve 1X47 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1X47 from S2C, [Save to disk]
  • View 1X47 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1X47
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 1X47, from MSDmotif at EBI
  • Fold representative 1x47 from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1x47] [1x47_A]
  • SWISS-PROT database: [Q8WYQ5]
  • Domain organization of [DGCR8_HUMAN] by SWISSPFAM
  • Domain found in 1X47: [DSRM ] by SMART
  • Other resources with information on 1X47
  • Community annotation for 1X47 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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