OCA Atlas for 1YAU

1YAU

date

authors

compound

source

symmetry

R_factor

R_Free

crystal
cell

length a	length b	length c	angle alpha	angle beta	angle gamma

method

X-Ray Diffraction

resolution

ligand

GOL, SO4

enzyme

Gene
Ontology

Chain	Function	Process	Component
D, A, E, F, B, C, G
K, I, L, H, M, N, J
S, R, Q, P, O, T, U

Primary reference

The 1.9 A structure of a proteasome-11S activator complex and implications for proteasome-PAN/PA700 interactions., Forster A, Masters EI, Whitby FG, Robinson H, Hill CP, Mol Cell 2005 May 27;18(5):589-99. PMID:15916965

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (728 Kb) [Save to disk]

Biological Unit Coordinates (1yau.pdb1.gz) 1433 Kb

LPC: Ligand-Protein Contacts for 1YAU

CSU: Contacts of Structural Units for 1YAU

Likely Quarternary Molecular Structure file(s) for 1YAU

Structure Factors (3492 Kb)

Retrieve 1YAU in mmCIF format [Save to disk]

SEQRES to COORDINATES correlation for 1YAU from S2C, [Save to disk]

Re-refined 1yau structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 1YAU in 3D

Proteopedia, because life has more than 2D.

On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.

On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1yau] [1yau_A] [1yau_B] [1yau_C] [1yau_D] [1yau_E] [1yau_F] [1yau_G] [1yau_H] [1yau_I] [1yau_J] [1yau_K] [1yau_L] [1yau_M] [1yau_N] [1yau_O] [1yau_P] [1yau_Q] [1yau_R] [1yau_S] [1yau_T] [1yau_U]

SWISS-PROT database: [P25156] [P28061] [Q9U8G2]

Domain found in 1YAU: [Proteasome_A_N ] by SMART

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