1YJ7 date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand GOL, PO4 enzyme
note 1YJ7 is a representative structure
Gene
Ontology
ChainFunctionProcessComponent
D, A, B, C


Primary referenceStructural characterization of the molecular platform for type III secretion system assembly., Yip CK, Kimbrough TG, Felise HB, Vuckovic M, Thomas NA, Pfuetzner RA, Frey EA, Finlay BB, Miller SI, Strynadka NC, Nature. 2005 Jun 2;435(7042):702-7. PMID:15931226
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (110 Kb) [Save to disk]
  • Biological Unit Coordinates (1yj7.pdb1.gz) 105 Kb
  • LPC: Ligand-Protein Contacts for 1YJ7
  • CSU: Contacts of Structural Units for 1YJ7
  • Likely Quarternary Molecular Structure file(s) for 1YJ7
  • Structure Factors (819 Kb)
  • Retrieve 1YJ7 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1YJ7 from S2C, [Save to disk]
  • Re-refined 1yj7 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 1YJ7 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1yj7] [1yj7_A] [1yj7_B] [1yj7_C] [1yj7_D]
  • SWISS-PROT database: [Q8VQD3]

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