1YM0		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
ligand	FUC, MAN, MG, NAG, PCA, SO4	enzyme
note	1YM0 is a representative structure
Gene Ontology	Chain Function Process Component A
Primary reference	Crystal structure of earthworm fibrinolytic enzyme component B: a novel, glycosylated two-chained trypsin., Wang F, Wang C, Li M, Zhang JP, Gui LL, An XM, Chang WR, J Mol Biol. 2005 May 6;348(3):671-85. PMID:15826663

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (52 Kb) [Save to disk] Biological Unit Coordinates (1ym0.pdb1.gz) 47 Kb Biological Unit Coordinates (1ym0.pdb2.gz) 92 Kb LPC: Ligand-Protein Contacts for 1YM0 CSU: Contacts of Structural Units for 1YM0 Likely Quarternary Molecular Structure file(s) for 1YM0 Structure Factors (370 Kb) Retrieve 1YM0 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 1YM0 from S2C, [Save to disk] Re-refined 1ym0 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 1YM0 in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1ym0] [1ym0_A] [1ym0_B] SWISS-PROT database: [Q3HR18] Domain found in 1YM0: [Tryp_SPc ] by SMART

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