1Z83	Transferase	date	Mar 29, 2005
title	Crystal Structure Of Human Ak1a In Complex With Ap5a
authors	P.Filippakopoulos, G.Bunkoczi, A.Jansson, A.Schreurs, S.Knapp, A. F.Von Delft, M.Sundstrom, Structural Genomics Consortium (Sgc
compound		source
Molecule: Adenylate Kinase 1 Chain: A, B, C Synonym: Atp-Amp Transphosphorylase, Ak1, Myokinase Ec: 2.7.4.3 Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Ak1 Expression_system: Escherichia Coli Bl21(De3) Expression_system_taxid: 469008 Expression_system_strain: Bl21-De3 Expression_system_vector_type: Plic-Sgc Expression_system_plasmid: Hak1a-Plic
symmetry	Space Group: C 1 2 1	R_factor 0.169 R_Free 0.218
crystal cell	length a length b length c angle alpha angle beta angle gamma 126.194 46.259 119.576 90.00 116.01 90.00
method	X-Ray Diffraction	resolution	1.90 Å
ligand	AP5, SO4, ZN	enzyme	Transferase E.C.2.7.4.3 BRENDA
related structures	by homologous chain: 3ADK
Gene Ontology	Chain Function Process Component A, C, B adenylate kinase activity

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (110 Kb) [Save to disk] Biological Unit Coordinates (1z83.pdb1.gz) 70 Kb Biological Unit Coordinates (1z83.pdb2.gz) 68 Kb Biological Unit Coordinates (1z83.pdb3.gz) 35 Kb LPC: Ligand-Protein Contacts for 1Z83 CSU: Contacts of Structural Units for 1Z83 Likely Quarternary Molecular Structure file(s) for 1Z83 Structure Factors (376 Kb) Retrieve 1Z83 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 1Z83 from S2C, [Save to disk] Re-refined 1z83 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 1Z83 in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 1Z83

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 1Z83, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1z83_C] [1z83_B] [1z83] [1z83_A] SWISS-PROT database: [P00568] Domain organization of [KAD1_HUMAN] by SWISSPFAM

Other resources with information on 1Z83

Community annotation for 1Z83 at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

Movements, Movies and Images

Adenylate Kinase (the movie) Images from IMB Jena Image Library of Biological Macromolecules.

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