1COZ Transferase date May 29, 1999
title Ctp:Glycerol-3-Phosphate Cytidylyltransferase From Bacillus Subtilis
authors C.H.Weber, Y.S.Park, S.Sanker, C.Kent, M.L.Ludwig
compound source
Molecule: Protein (Glycerol-3-Phosphate Cytidylyltransferase);
Chain: A, B
Ec: 2.7.7.39
Engineered: Yes
Organism_scientific: Bacillus Subtilis
Organism_taxid: 1423
Strain: Br151-Esc168
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet-11a
symmetry Space Group: P 1 21 1
R_factor 0.196 R_Free 0.255
crystal
cell
length a length b length c angle alpha angle beta angle gamma
44.500 61.400 56.400 90.00 113.10 90.00
method X-Ray Diffractionresolution 2.00 Å
ligand CTP enzyme Transferase E.C.2.7.7.39 BRENDA
related structures by homologous chain: 1N1D
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceA prototypical cytidylyltransferase: CTP:glycerol-3-phosphate cytidylyltransferase from bacillus subtilis., Weber CH, Park YS, Sanker S, Kent C, Ludwig ML, Structure Fold Des 1999 Sep 15;7(9):1113-24. PMID:10508782
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (51 Kb) [Save to disk]
  • Biological Unit Coordinates (1coz.pdb1.gz) 47 Kb
  • LPC: Ligand-Protein Contacts for 1COZ
  • CSU: Contacts of Structural Units for 1COZ
  • Likely Quarternary Molecular Structure file(s) for 1COZ
  • Retrieve 1COZ in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1COZ from S2C, [Save to disk]
  • View 1COZ in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1COZ
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 1COZ, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1coza_, region A [Jmol] [rasmolscript] [script source]
        - Domain d1cozb_, region B [Jmol] [rasmolscript] [script source]
  • Fold representative 1coz from FSSP and Dali (Families of Structurally Similar Proteins)
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1coz_B] [1coz] [1coz_A]
  • SWISS-PROT database: [P27623]
  • Domain organization of [TAGD_BACSU] by SWISSPFAM
  • Other resources with information on 1COZ
  • Community annotation for 1COZ at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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