1QQJ Hydrolase date Jun 07, 1999
title Crystal Structure Of Mouse Fumarylacetoacetate Hydrolase Ref 1.55 Angstrom Resolution
authors D.E.Timm, H.A.Mueller, P.Bhanumoorthy, J.M.Harp, G.J.Bunick
compound source
Molecule: Fumarylacetoacetate Hydrolase
Chain: A, B
Synonym: Betadiketonase, Faa
Ec: 3.7.1.2
Engineered: Yes
Organism_scientific: Mus Musculus
Organism_common: House Mouse
Organism_taxid: 10090
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_vector: Plasmid
Expression_system_plasmid: Pgex
symmetry Space Group: P 1 21 1
R_factor 0.183 R_Free 0.211
crystal
cell
length a length b length c angle alpha angle beta angle gamma
64.000 109.020 65.240 90.00 95.68 90.00
method X-Ray Diffractionresolution 1.55 Å
ligand ACT, CA, CAC enzyme Hydrolase E.C.3.7.1.2 BRENDA
related structures by homologous chain: 1HYO, 1QCO
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceCrystal structure and mechanism of a carbon-carbon bond hydrolase., Timm DE, Mueller HA, Bhanumoorthy P, Harp JM, Bunick GJ, Structure Fold Des 1999 Sep 15;7(9):1023-33. PMID:10508789
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (148 Kb) [Save to disk]
  • Biological Unit Coordinates (1qqj.pdb1.gz) 144 Kb
  • LPC: Ligand-Protein Contacts for 1QQJ
  • CSU: Contacts of Structural Units for 1QQJ
  • Likely Quarternary Molecular Structure file(s) for 1QQJ
  • Structure Factors (851 Kb)
  • Retrieve 1QQJ in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1QQJ from S2C, [Save to disk]
  • Re-refined 1qqj structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 1QQJ in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1QQJ
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1QQJ, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1qqja1, region A:1-118 [Jmol] [rasmolscript] [script source]
        - Domain d1qqja2, region A:119-416 [Jmol] [rasmolscript] [script source]
        - Domain d1qqjb1, region B:1-118 [Jmol] [rasmolscript] [script source]
        - Domain d1qqjb2, region B:119-416 [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1qqj] [1qqj_B] [1qqj_A]
  • SWISS-PROT database: [P35505]
  • Domain organization of [FAAA_MOUSE] by SWISSPFAM
  • Other resources with information on 1QQJ
  • Community annotation for 1QQJ at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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