1QQJ CRYSTAL STRUCTURE OF MOUSE FUMARYLACETOACETATE HYDROLASE REFINED AT 1.55 ANGSTROM RESOLUTION date
authors Timm, D.E., Mueller, H.A., Bhanumoorthy, P., Harp, J.M., Bunick, G.J.
compound source
symmetry
R_factor
R_Free 0.2110000
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 1.55
ligand ACT, CA, CAC enzyme
related structures by homologous chain: 1HYO, 1QCO
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceCrystal structure and mechanism of a carbon-carbon bond hydrolase., Timm DE, Mueller HA, Bhanumoorthy P, Harp JM, Bunick GJ, Structure Fold Des 1999 Sep 15;7(9):1023-33. PMID:10508789
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (151 Kb) [Save to disk]
  • Biological Unit Coordinates (1qqj.pdb1.gz) 147 Kb
  • LPC: Ligand-Protein Contacts for 1QQJ
  • CSU: Contacts of Structural Units for 1QQJ
  • Likely Quarternary Molecular Structure file(s) for 1QQJ
  • Structure Factors (851 Kb)
  • Retrieve 1QQJ in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1QQJ from S2C, [Save to disk]
  • Re-refined 1qqj structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 1QQJ in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 1QQJ
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 1QQJ, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1qqja1, region A:1-118 [Jmol] [rasmolscript] [script source]
        - Domain d1qqja2, region A:119-416 [Jmol] [rasmolscript] [script source]
        - Domain d1qqjb1, region B:1-118 [Jmol] [rasmolscript] [script source]
        - Domain d1qqjb2, region B:119-416 [Jmol] [rasmolscript] [script source]
  • Fold representative 1qqj from FSSP and Dali (Families of Structurally Similar Proteins)
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1qqj] [1qqj_B] [1qqj_A]
  • SWISS-PROT database: [P35505]
  • Domain organization of [FAAA_MOUSE] by SWISSPFAM
    • Other resources with information on 1QQJ
  • Community annotation for 1QQJ at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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