2A5E Anti-Oncogene date Feb 13, 1998
title Solution Nmr Structure Of Tumor Suppressor P16ink4a, Restrai Minimized Mean Structure
authors I.J.L.Byeon, J.Li, K.Ericson, T.L.Selby, A.Tevelev, H.J.Kim, P.O M.D.Tsai
compound source
Molecule: Tumor Suppressor P16ink4a
Chain: A
Engineered: Yes
 Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Expression_system: Escherichia Coli Bl21(De3)
Expression_system_taxid: 469008
Expression_system_strain: Bl21 (De3)
methodSolution NMR
related structures by homologous chain: 1D9S
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceTumor suppressor p16INK4A: determination of solution structure and analyses of its interaction with cyclin-dependent kinase 4., Byeon IJ, Li J, Ericson K, Selby TL, Tevelev A, Kim HJ, O'Maille P, Tsai MD, Mol Cell 1998 Feb;1(3):421-31. PMID:9660926
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (47 Kb) [Save to disk]
  • Biological Unit Coordinates (2a5e.pdb1.gz) 43 Kb
  • CSU: Contacts of Structural Units for 2A5E
  • Experimental data, such as chemical shifts, at BioMagResBank (BMRB)
  • NMR Restraints Grid from BioMagResBank (BMRB)
  • Retrieve 2A5E in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2A5E from S2C, [Save to disk]
    • View 2A5E in 3D
  • Proteopedia, because life has more than 2D.
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    • Visual 3D analysis of 2A5E
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2A5E, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d2a5e__, region [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2a5e_A] [2a5e]
  • SWISS-PROT database: [P42771]
  • Domain organization of [CD2A1_HUMAN] by SWISSPFAM
  • Domain found in 2A5E: [ANK ] by SMART
    • Other resources with information on 2A5E
  • Community annotation for 2A5E at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Domain movements in 2A5E from the Database of Macromolecular Movements.
  • Images from IMB Jena Image Library of Biological Macromolecules.

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