2AIN Cell Adhesion Transferase date Jul 30, 2005
title Solution Structure Of The Af-6 Pdz Domain Complexed With The C-Terminal Peptide From The Bcr Protein
authors Q.Chen, J.Wu, Y.Shi
compound source
Molecule: Afadin
Chain: A
Fragment: Af-6 Pdz Domain
Synonym: Af-6 Protein
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Expression_system: Escherichia Coli Bl21(De3)
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De3)
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet22b (+)

Molecule: 6-Mer Peptide From Breakpoint Cluster Region Protein;
Chain: B
Fragment: C-Terminal Peptide
Ec: 2.7.1.-
Engineered: Yes

Synthetic: Yes
Other_details: This Sequence Occurs Naturally In Humans.
methodSolution NMR
ligand
enzyme Transferase E.C.2.7.1 BRENDA
Primary referenceSolution structure and backbone dynamics of the AF-6 PDZ domain/Bcr peptide complex., Chen Q, Niu X, Xu Y, Wu J, Shi Y, Protein Sci. 2007 Jun;16(6):1053-62. Epub 2007 May 1. PMID:17473018
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (494 Kb) [Save to disk]
  • CSU: Contacts of Structural Units for 2AIN
  • Original NMR restraints for 2AIN from PDB
  • Retrieve 2AIN in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2AIN from S2C, [Save to disk]
  • View 2AIN in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2AIN
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 2AIN, from MSDmotif at EBI
  • Fold representative 2ain from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2ain_A] [2ain_B] [2ain]
  • SWISS-PROT database: [P55196] [P11274]
  • Domain organization of [AFAD_HUMAN] [BCR_HUMAN] by SWISSPFAM
  • Domain found in 2AIN: [PDZ ] by SMART
  • Other resources with information on 2AIN
  • Community annotation for 2AIN at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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