2B69	Lyase	date	Sep 30, 2005
title	Crystal Structure Of Human Udp-Glucoronic Acid Decarboxylase
authors	E.Ugochukwu, E.Dubinina, K.Kavanagh, M.Sundstrom, J.Weigelt, A.Ed C.Arrowsmith, F.Von Delft, U.Oppermann, Structural Genomics Co (Sgc)
compound		source
Molecule: Udp-Glucuronate Decarboxylase 1 Chain: A Fragment: Uxs1 Ec: 4.1.1.35 Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Uxs1 Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_strain: B834 (De3) Methionine Auxotroph Expression_system_vector_type: P11
symmetry	Space Group: P 1 2 1	R_factor 0.134 R_Free 0.162
crystal cell	length a length b length c angle alpha angle beta angle gamma 46.000 45.000 85.000 90.00 97.00 90.00
method	X-Ray Diffraction	resolution	1.21 Å
ligand	MSE, NAD, UDP	enzyme	Lyase E.C.4.1.1.35 BRENDA
note	2B69 is a representative structure

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (125 Kb) [Save to disk] Biological Unit Coordinates (2b69.pdb1.gz) 237 Kb LPC: Ligand-Protein Contacts for 2B69 CSU: Contacts of Structural Units for 2B69 Likely Quarternary Molecular Structure file(s) for 2B69 Structure Factors (711 Kb) Retrieve 2B69 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 2B69 from S2C, [Save to disk] Re-refined 2b69 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 2B69 in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 2B69

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 2B69, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [2b69_A] [2b69] SWISS-PROT database: [Q8NBZ7] Domain organization of [UXS1_HUMAN] by SWISSPFAM

Other resources with information on 2B69

Community annotation for 2B69 at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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