2BOV	Transferase	date	Apr 14, 2005
title	Molecular Recognition Of An Adp-Ribosylating Clostridium Bot Exoenzyme By Rala Gtpase
authors	K.P.Holbourn, J.M.Sutton, H.R.Evans, C.C.Shone, K.R.Acharya
compound		source
Molecule: Ras-Related Protein Ral-A Chain: A Synonym: Rala Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_strain: Jm109 Expression_system_vector: Escherichia Coli Expression_system_plasmid: Pgex-2t
Molecule: Mono-Adp-Ribosyltransferase C3 Chain: B Synonym: C3bot1 Exoenzyme, Exoenzyme C3 Ec: 2.4.2.- Engineered: Yes		Organism_scientific: Clostridium Botulinum Organism_taxid: 1491 Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_strain: Jm109 Expression_system_vector: Escherichia Coli Expression_system_plasmid: Pmal
symmetry	Space Group: P 21 21 21	R_factor 0.206 R_Free 0.274
crystal cell	length a length b length c angle alpha angle beta angle gamma 56.629 90.836 100.400 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	2.66 Å
ligand	GDP, MG	enzyme	Transferase E.C.2.4.2 BRENDA
note	2BOV supersedes 1WCA
related structures	by homologous chain: 1GZE, 1GZF, 1ZC4
Gene Ontology	Chain Function Process Component A B
Primary reference	Molecular recognition of an ADP-ribosylating Clostridium botulinum C3 exoenzyme by RalA GTPase., Holbourn KP, Sutton JM, Evans HR, Shone CC, Acharya KR, Proc Natl Acad Sci U S A. 2005 Apr 12;102(15):5357-62. Epub 2005 Apr 4. PMID:15809419

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (73 Kb) [Save to disk] Biological Unit Coordinates (2bov.pdb1.gz) 67 Kb LPC: Ligand-Protein Contacts for 2BOV CSU: Contacts of Structural Units for 2BOV Likely Quarternary Molecular Structure file(s) for 2BOV Structure Factors (132 Kb) Retrieve 2BOV in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 2BOV from S2C, [Save to disk] Re-refined 2bov structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 2BOV in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 2BOV

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 2BOV, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [2bov_A] [2bov] [2bov_B] SWISS-PROT database: [P15879] [P11233] Domain organization of [ARC3_CBDP] [RALA_HUMAN] by SWISSPFAM Domain found in 2BOV: [RAS ] by SMART

Other resources with information on 2BOV

Community annotation for 2BOV at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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