2BYJ	Transferase	date	Aug 02, 2005
title	Ornithine Aminotransferase Mutant Y85i
authors	M.Markova, C.Peneff, M.J.E.Hewlins, T.Schirmer, R.A.John
compound		source
Molecule: Ornithine Aminotransferase Chain: A, B, C Ec: 2.6.1.13 Engineered: Yes Mutation: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_strain: Xl1 Expression_system_vector: Pmal-C2
symmetry	Space Group: P 32 2 1	R_factor 0.207 R_Free 0.226
crystal cell	length a length b length c angle alpha angle beta angle gamma 115.723 115.723 186.551 90.00 90.00 120.00
method	X-Ray Diffraction	resolution	3.02 Å
ligand	PLP	enzyme	Transferase E.C.2.6.1.13 BRENDA
Gene Ontology	Chain Function Process Component A, C, B
Primary reference	Determinants of substrate specificity in omega-aminotransferases., Markova M, Peneff C, Hewlins MJ, Schirmer T, John RA, J Biol Chem. 2005 Oct 28;280(43):36409-16. Epub 2005 Aug 11. PMID:16096275

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (180 Kb) [Save to disk] Biological Unit Coordinates (2byj.pdb1.gz) 117 Kb Biological Unit Coordinates (2byj.pdb2.gz) 116 Kb LPC: Ligand-Protein Contacts for 2BYJ CSU: Contacts of Structural Units for 2BYJ Likely Quarternary Molecular Structure file(s) for 2BYJ Retrieve 2BYJ in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 2BYJ from S2C, [Save to disk]

View 2BYJ in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 2BYJ

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Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 2BYJ, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [2byj_A] [2byj] [2byj_C] [2byj_B] SWISS-PROT database: [P04181] Domain organization of [OAT_HUMAN] by SWISSPFAM

Other resources with information on 2BYJ

Community annotation for 2BYJ at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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