2BZL Hydrolase date Aug 18, 2005
title Crystal Structure Of The Human Protein Tyrosine Phosphatase 65 A Resolution
authors J.E.Debreczeni, A.Barr, J.Eswaran, S.Das, N.Burgess, E.Longman, O. O.Gileadi, F.Von Delft, M.Sundstrom, C.Arrowsmith, J.Weigelt, A. S.Knapp
compound source
Molecule: Tyrosine-Protein Phosphatase, Non-Receptor Type 1
Chain: A
Fragment: Catalytic Domain, Residues 886-1187
Synonym: Protein-Tyrosine Phosphatase Pez
Ec: 3.1.3.48
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Expression_system: Escherichia Coli Bl21(De3)
Expression_system_taxid: 469008
Expression_system_variant: Rosetta
Expression_system_vector: T7
Expression_system_plasmid: Plic Sgc
symmetry Space Group: P 32 2 1
R_factor 0.185 R_Free 0.217
crystal
cell
length a length b length c angle alpha angle beta angle gamma
87.636 87.636 77.115 90.00 90.00 120.00
method X-Ray Diffractionresolution 1.65 Å
ligand EDO, SO4 enzyme Hydrolase E.C.3.1.3.48 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceCrystal structure of human protein tyrosine phosphatase 14 (PTPN14) at 1.65-A resolution., Barr AJ, Debreczeni JE, Eswaran J, Knapp S, Proteins. 2006 Jun 1;63(4):1132-6. PMID:16534812
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (106 Kb) [Save to disk]
  • Biological Unit Coordinates (2bzl.pdb1.gz) 101 Kb
  • LPC: Ligand-Protein Contacts for 2BZL
  • CSU: Contacts of Structural Units for 2BZL
  • Likely Quarternary Molecular Structure file(s) for 2BZL
  • Structure Factors (536 Kb)
  • Retrieve 2BZL in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2BZL from S2C, [Save to disk]
  • Re-refined 2bzl structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2BZL in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2BZL
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 2BZL, from MSDmotif at EBI
  • Fold representative 2bzl from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2bzl] [2bzl_A]
  • SWISS-PROT database: [Q15678]
  • Domain organization of [PTN14_HUMAN] by SWISSPFAM
  • Domain found in 2BZL: [PTPc ] by SMART
  • Other resources with information on 2BZL
  • Community annotation for 2BZL at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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