2C0C Oxidoreductase date Aug 30, 2005
title Structure Of The Mgc45594 Gene Product
authors G.Bunkoczi, N.Shafqat, K.Guo, C.Smee, C.Arrowsmith, A.Edwards, J.W M.Sundstrom, O.Gileadi, F.Von Delft, U.Oppermann
compound source
Molecule: Zinc Binding Alcohol Dehydrogenase, Domain Contai
Chain: A, B
Fragment: Domain, Residues 33-371
Synonym: Mgc45594 Hypothetical Protein
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Expression_system: Escherichia Coli Bl21(De3)
Expression_system_taxid: 469008
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pnic-Bsa4
symmetry Space Group: P 1 21 1
R_factor 0.163 R_Free 0.216
crystal
cell
length a length b length c angle alpha angle beta angle gamma
61.164 82.137 73.905 90.00 112.54 90.00
method X-Ray Diffractionresolution 1.45 Å
ligand NAP enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, B
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  • Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (242 Kb) [Save to disk]
  • Biological Unit Coordinates (2c0c.pdb1.gz) 122 Kb
  • Biological Unit Coordinates (2c0c.pdb2.gz) 118 Kb
  • LPC: Ligand-Protein Contacts for 2C0C
  • CSU: Contacts of Structural Units for 2C0C
  • Likely Quarternary Molecular Structure file(s) for 2C0C
  • Structure Factors (1538 Kb)
  • Retrieve 2C0C in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2C0C from S2C, [Save to disk]
  • Re-refined 2c0c structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2C0C in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2C0C
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2C0C, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2c0c_B] [2c0c] [2c0c_A]
  • SWISS-PROT database: [Q8N4Q0]
  • Domain organization of [ZADH2_HUMAN] by SWISSPFAM
  • Other resources with information on 2C0C
  • Community annotation for 2C0C at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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