2DDB date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand FMT, GOL, NA enzyme
Gene
Ontology
ChainFunctionProcessComponent
C, A, D, B
  • toxin activity


    • Primary referenceStructures of pseudechetoxin and pseudecin, two snake-venom cysteine-rich secretory proteins that target cyclic nucleotide-gated ion channels: implications for movement of the C-terminal cysteine-rich domain., Suzuki N, Yamazaki Y, Brown RL, Fujimoto Z, Morita T, Mizuno H, Acta Crystallogr D Biol Crystallogr. 2008 Oct;64(Pt 10):1034-42. Epub 2008, Sep 19. PMID:18931410
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (153 Kb) [Save to disk]
  • Biological Unit Coordinates (2ddb.pdb1.gz) 40 Kb
  • Biological Unit Coordinates (2ddb.pdb2.gz) 40 Kb
  • Biological Unit Coordinates (2ddb.pdb3.gz) 40 Kb
  • Biological Unit Coordinates (2ddb.pdb4.gz) 39 Kb
  • LPC: Ligand-Protein Contacts for 2DDB
  • CSU: Contacts of Structural Units for 2DDB
  • Likely Quarternary Molecular Structure file(s) for 2DDB
  • Structure Factors (1125 Kb)
  • Retrieve 2DDB in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2DDB from S2C, [Save to disk]
  • Re-refined 2ddb structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 2DDB in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2ddb] [2ddb_A] [2ddb_B] [2ddb_C] [2ddb_D]
  • SWISS-PROT database: [Q8AVA3]
  • Domain found in 2DDB: [SCP ] by SMART

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