2DE0	Crystal structure of human alpha 1,6-fucosyltransferase, FUT8	date
authors	Taniguchi, N., Ihara, H., Nakagawa, A.
compound		source
symmetry		R_factor R_Free 0.28336
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution	2.61
Gene Ontology	Chain Function Process Component X
Primary reference	Crystal Structure of Mammalian {alpha}1,6-Fucosyltransferase, FUT8., Ihara H, Ikeda Y, Toma S, Wang X, Suzuki T, Gu J, Miyoshi E, Tsukihara T, Honke K, Matsumoto A, Nakagawa A, Taniguchi N, Glycobiology. 2006 Dec 15;. PMID:17172260

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (85 Kb) [Save to disk] Biological Unit Coordinates (2de0.pdb1.gz) 156 Kb CSU: Contacts of Structural Units for 2DE0 Likely Quarternary Molecular Structure file(s) for 2DE0 Structure Factors (237 Kb) Retrieve 2DE0 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 2DE0 from S2C, [Save to disk] Re-refined 2de0 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 2DE0 in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 2DE0

Cartoon representation from PDB Cartoon Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute Crystal Contacts, from CryCo at Weizmann Institute 3D motif for 2DE0, from MSDmotif at EBI Fold representative 2de0 from FSSP and Dali (Families of Structurally Similar Proteins)

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [2de0] [2de0_X] SWISS-PROT database: [Q9BYC5] Domain organization of [FUT8_HUMAN] by SWISSPFAM Domain found in 2DE0: [SH3 ] by SMART

Other resources with information on 2DE0

Community annotation for 2DE0 at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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