2DEM		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
ligand	2HP, EOH, GOL, ORP, SF4	enzyme
Gene Ontology	Chain Function Process Component A
Primary reference	Crystal structure of family 5 uracil-DNA glycosylase bound to DNA., Kosaka H, Hoseki J, Nakagawa N, Kuramitsu S, Masui R, J Mol Biol. 2007 Nov 2;373(4):839-50. Epub 2007 Aug 21. PMID:17870091

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (58 Kb) [Save to disk] Biological Unit Coordinates (2dem.pdb1.gz) 53 Kb LPC: Ligand-Protein Contacts for 2DEM CSU: Contacts of Structural Units for 2DEM Likely Quarternary Molecular Structure file(s) for 2DEM Structure Factors (604 Kb) Retrieve 2DEM in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 2DEM from S2C, [Save to disk] Re-refined 2dem structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 2DEM in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [2dem] [2dem_A] [2dem_C] [2dem_D] SWISS-PROT database: [Q5SJ65] Domains found in 2DEM: [UDG] [UreE_C ] by SMART

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