2DV6 date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand CU, K enzyme
Gene
Ontology
ChainFunctionProcessComponent
D, A, C, F, E, B


Primary referenceStructure and function of a hexameric copper-containing nitrite reductase., Nojiri M, Xie Y, Inoue T, Yamamoto T, Matsumura H, Kataoka K, Deligeer, Yamaguchi K, Kai Y, Suzuki S, Proc Natl Acad Sci U S A. 2007 Mar 13;104(11):4315-20. Epub 2007 Mar 5. PMID:17360521
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (423 Kb) [Save to disk]
  • Biological Unit Coordinates (2dv6.pdb1.gz) 414 Kb
  • LPC: Ligand-Protein Contacts for 2DV6
  • CSU: Contacts of Structural Units for 2DV6
  • Likely Quarternary Molecular Structure file(s) for 2DV6
  • Structure Factors (1394 Kb)
  • Retrieve 2DV6 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2DV6 from S2C, [Save to disk]
  • Re-refined 2dv6 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2DV6 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2dv6_F] [2dv6] [2dv6_A] [2dv6_B] [2dv6_C] [2dv6_D] [2dv6_E]
  • SWISS-PROT database: [Q8KKH4]

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