2F8V Contractile Protein Contractile Protein date Dec 04, 2005
title Structure Of Full Length Telethonin In Complex With The N-Te Titin
authors N.Pinotsis, M.Petoukhov, S.Lange, D.Svergun, P.Zou, M.Gautel, M.Wi
compound source
Molecule: N2b-Titin Isoform
Chain: A, B, C, D
Fragment: Domains Z1z2, Residues 1-196
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Expression_system: Escherichia Coli
Expression_system_taxid: 562

Molecule: Telethonin
Chain: T, Y
Synonym: Titin Cap Protein
Engineered: Yes
Mutation: Yes

Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Tcap
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: P 1 21 1
R_factor 0.267 R_Free 0.287
crystal
cell
length a length b length c angle alpha angle beta angle gamma
112.513 46.885 128.033 90.00 98.30 90.00
method X-Ray Diffractionresolution 2.75 Å
ligand SO4 enzyme
Gene
Ontology
ChainFunctionProcessComponent
T, Y


Primary referenceEvidence for a dimeric assembly of two titin/telethonin complexes induced by the telethonin C-terminus., Pinotsis N, Petoukhov M, Lange S, Svergun D, Zou P, Gautel M, Wilmanns M, J Struct Biol. 2006 Apr 27;. PMID:16713295
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (157 Kb) [Save to disk]
  • Biological Unit Coordinates (2f8v.pdb1.gz) 77 Kb
  • Biological Unit Coordinates (2f8v.pdb2.gz) 75 Kb
  • LPC: Ligand-Protein Contacts for 2F8V
  • CSU: Contacts of Structural Units for 2F8V
  • Likely Quarternary Molecular Structure file(s) for 2F8V
  • Structure Factors (249 Kb)
  • Retrieve 2F8V in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2F8V from S2C, [Save to disk]
  • Re-refined 2f8v structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2F8V in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2F8V
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 2F8V, from MSDmotif at EBI
  • Fold representative 2f8v from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2f8v] [2f8v_T] [2f8v_B] [2f8v_A] [2f8v_C] [2f8v_Y] [2f8v_D]
  • SWISS-PROT database: [O15273] [Q8WZ42]
  • Domain organization of [TELT_HUMAN] [TITIN_HUMAN] by SWISSPFAM
  • Domains found in 2F8V: [IG_like] [IGc2 ] by SMART
  • Alignments of the sequence of 2F8V with the sequences similar proteins can be viewed for 2F8V's classification [TELT_HUMAN] [TITIN_HUMAN] at ProtoMap. Click on "Neighbors List", then on the "See Alignments" button below the list.
  • A sequence distance tree ("phylogenetic tree") can be viewed for 1ACL's classification [TELT_HUMAN] [TITIN_HUMAN] at ProtoMap. Click on the Cluster number.
  • Other resources with information on 2F8V
  • Community annotation for 2F8V at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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